LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra7g0158	ATGACTCTTATCTGTGGAAACCTTCTTTCTCAATGGCTTATACTCATTCTCATGTTTCAATATGTTTCTGCACTGATCCTACCCAACAATGAAACTGTGCCAGCAGTCATTGTCTTTGGGGACTCCATAGTAGATACAGGAAACAACAACTATATCTCCACTCTTGTCAAATGCAATTTCCCACCATATGGTAGAGATTTTGCCGAAGGAAATCATCCATCTGGGAGGTTCAGCAATGGCTTAGTCCCATCAGATATTATTGCTGCAAAATTTGGAGTCAAGAAGTTCTTACCTCCTTATCTCGATCCAACTTTGCAGCTTCAAGATCTCCTCACTGGTGTAAGCTTTGCCTCAGGTGGGGCCGGATATGATCCTCTAACAGCCGAATTAGTGTCTGTGATGTCATTGTCAGATCAATTAGTCATGTTCAAGGAGTATATAGACAAGATTAAAGATGCAGTTGGAGGAAACAGAACCACACAAATAGTGTCTAAGAGCATATACATAGTGTGCATAGGAAGTGATGACATTGCCAATACTTACATTCAATCACCGTTTAGGCGTGCTGAGTATGATATTCCTTCATACACTGATCTAATGGCCTCTGAAGCCTCAAAGTTCTTTGAGACACTTTATGGAATGGGAGCTAGAAGGATCGGAGTGTTTGGTATACCAGCTATAGGGTGTGTGCCCTCTCAAAGAACAATGGCTGGAGGCTTAGATAGAGCATGTGTAGAATCTTCTAATGAAGCGGCGATGCTCTTCAATTCGAAGCTTTCTTCTAAAATGGATGCCCTTGGAAAGAAGTTACCAGACGCTAGACTTGTTTACCTTGATTCTTACAATGGATTGCTAAAAATGATTAGAGAACCTGCTAAATATGGTTTCGAAGTGACAGAGAAAGGATGCTGCGGCACAGGGAATATAGAAGTGAGCATTTTGTGCAACCGCTACATCATAAACACATGCTCCAACTCTTCTGACTACATATTTTGGGACAGCTATCATCCAACAGAGCAGGCTTACTATGTTCTTAGTACTTTAACACTCGATGAAAAAGTTAAGCATTATCTGTGCACTTTTAAGGAAGCACACTACATGCATGAACAAAGTTTCGTGAGAAACTTGAAGACTAAATCAGTTGCCTTGCTTAAATACCTAACACCAACGGCCAAATCACAAACAAATTACAGCAAGTTTGCAATTCCTGCTGTCATAGCTTTTGGTGATTCAATCTTGGATACTGGGAACAACGATTATATTGAGACCATAATGAAGGCAGATTTCAGACCATATGGGAGGGATTTCTTCGGAGGAAAACCCACAGGGAGATTTAGCAATGGCAGGATCCCTTCAGACTTTTTAGTTGAAAAGTTTGGAATAAAGGAGACTCTGCCACCCTATCTTGATCCAACTCTGGAGATTGAAGACCTATTAACTGGGGTGTCTTTTGCCTCTGCTGGCTCTGGATATGATCATCTAACAACAGAAGTAGCAGCAGTGCTATCAGTAGAGGATCAACTGAATATGTTCAAAGATTATATAGGAAAACTGAAGGCCGGTGCAGGGAAAGAAAGGACAGCTTTCATTCTAAGAGAAAGCGTATTTTTTATCAGTATGGGAAGTAATGACGTTTCAGTAACATATTTCATGTCACCATATCGGAGAAATGAGTATAATGTTGAAGAGTATACAAGTATGCTAGTCCATATATGTTCAAATTTTCTTCAGGAACTGTATAAATATGGAGCAAGAAAGATTGGAGTACTGAGCCTATCTCCAATAGGATGTGTGCCACTGCAAAGAACATTAGGGGGAGGTGGAGAAAGGAATTGCGTAGAATCAATAAACCAAGCAGCCATGGTCTTCAACTCCAAGCTTTCTTCTTCAATAGAGGCTCTCAACAAAAGTCTTCCAAAAGCTAGGCTTGTTTACCTTGACAACTATAGTGAACTCAATGAAATTATCCAACACTACAACGAATTTGGATTTGAAGTGGGGGACACTGCATGCTGTGGCGTTGGAAATATTGAAGCAGGCATTCTGTGTAATTCTTTGTCCTTAAAAGTATGTGAAAATGCTACAAAATATGTATTCTGGGACAGTATTCACCCCACAGAGCGAACTTACAGTATGCTTGTCACAAGTACCATGGCAAAAAATGTTCACAAGTTTGTTTGA	2181	0.4026	MTLICGNLLSQWLILILMFQYVSALILPNNETVPAVIVFGDSIVDTGNNNYISTLVKCNFPPYGRDFAEGNHPSGRFSNGLVPSDIIAAKFGVKKFLPPYLDPTLQLQDLLTGVSFASGGAGYDPLTAELVSVMSLSDQLVMFKEYIDKIKDAVGGNRTTQIVSKSIYIVCIGSDDIANTYIQSPFRRAEYDIPSYTDLMASEASKFFETLYGMGARRIGVFGIPAIGCVPSQRTMAGGLDRACVESSNEAAMLFNSKLSSKMDALGKKLPDARLVYLDSYNGLLKMIREPAKYGFEVTEKGCCGTGNIEVSILCNRYIINTCSNSSDYIFWDSYHPTEQAYYVLSTLTLDEKVKHYLCTFKEAHYMHEQSFVRNLKTKSVALLKYLTPTAKSQTNYSKFAIPAVIAFGDSILDTGNNDYIETIMKADFRPYGRDFFGGKPTGRFSNGRIPSDFLVEKFGIKETLPPYLDPTLEIEDLLTGVSFASAGSGYDHLTTEVAAVLSVEDQLNMFKDYIGKLKAGAGKERTAFILRESVFFISMGSNDVSVTYFMSPYRRNEYNVEEYTSMLVHICSNFLQELYKYGARKIGVLSLSPIGCVPLQRTLGGGGERNCVESINQAAMVFNSKLSSSIEALNKSLPKARLVYLDNYSELNEIIQHYNEFGFEVGDTACCGVGNIEAGILCNSLSLKVCENATKYVFWDSIHPTERTYSMLVTSTMAKNVHKFV*	727

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra7g0158	726	Pfam	GDSL-like Lipase/Acylhydrolase	36	345	IPR001087	GO:0016788
	Vra7g0158	726	Pfam	GDSL-like Lipase/Acylhydrolase	405	712	IPR001087	GO:0016788
	Vra7g0158	726	PANTHER	GDSL-LIKE LIPASE/ACYLHYDROLASE	395	725	-	-
	Vra7g0158	726	PANTHER	GDSL-LIKE LIPASE/ACYLHYDROLASE	13	357	-	-
	Vra7g0158	726	CDD	SGNH_plant_lipase_like	34	351	IPR035669	-
	Vra7g0158	726	PANTHER	GDSL ESTERASE/LIPASE EXL3	13	357	-	-
	Vra7g0158	726	PANTHER	GDSL ESTERASE/LIPASE EXL3	395	725	-	-
	Vra7g0158	726	Gene3D	SGNH hydrolase	391	722	IPR036514	-
	Vra7g0158	726	Gene3D	SGNH hydrolase	25	354	IPR036514	-
	Vra7g0158	726	CDD	SGNH_plant_lipase_like	403	714	IPR035669	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra7g0158	Vra-Chr7	2545757	2554234	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra7g0158	401	713	Pollen Coat Proteome	AT1G75910	39.937	1.75e-72	237

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra7g0158	-		-	ahf:112723705	967.222

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vra11g0800	11	6594289	6596429	Vra7g0158	7	2545757	2554234	PCT

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