Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0148 ATGGGTTCTGTTGGAATCAAAAGCTCGGGATCCGAGGTTGTCACCATTGATGTTCATGCAACCAAGGGTTTGATCCAGACCGGTCATGTTTATCTCGATGTCAGGACGGTGGAAGAGTTTCAGAAAGGACATGTGGATGCTGAGAAGATCATTAACATTCCGTACATGTTTAATACGCCAGAAGGTAGGGTGAAGAATCCGGAGTTTCTGAAGGAGGTTTTATCAGCGTGCAAGAAAGAAGATCGCATCATCGTGGGTTGTCAAAGTGGAGTGAGATCTGTGTATGCAACTAGTGATCTTCTGACGGAGGGTTTTAAAGATGTGAGGAACATGGGAGGAGGATATCTTGAGTGGGTTAAAAATCAATTTCCACTGAAAATACCTTTGGATTTGGTTAAAGATGAAGTTCCACTGAAAGCTCCTCTGGATTTGGTTAAAGATGAAGTTACAGTGAAAGAACCTTTGGACTTGCTTAAAAACGAATTACCATAA 492 0.4207 MGSVGIKSSGSEVVTIDVHATKGLIQTGHVYLDVRTVEEFQKGHVDAEKIINIPYMFNTPEGRVKNPEFLKEVLSACKKEDRIIVGCQSGVRSVYATSDLLTEGFKDVRNMGGGYLEWVKNQFPLKIPLDLVKDEVPLKAPLDLVKDEVTVKEPLDLLKNELP* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0148 163 PANTHER THIOSULFATE SULFURTRANSFERASE 18 8 128 IPR044684 GO:0003824
Vra7g0148 163 CDD RHOD 20 119 - -
Vra7g0148 163 PANTHER THIOSULFATE SULFURTRANSFERASE 18 8 128 - -
Vra7g0148 163 SMART rhod_4 16 124 IPR001763 -
Vra7g0148 163 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 12 125 IPR036873 -
Vra7g0148 163 ProSiteProfiles Rhodanese domain profile. 25 127 IPR001763 -
Vra7g0148 163 Pfam Rhodanese-like domain 26 120 IPR001763 -
Vra7g0148 163 Gene3D - 6 126 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0148 Vra-Chr7 2464930 2468320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0148 3 125 Sulfurtransferasese or Rhodanese AT5G66170 56.098 9.68e-51 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0148 - K15692 pvu:PHAVU_003G264200g 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0787 11 6487758 6489159 Vra7g0148 7 2464930 2468320 PCT
Vra11g0826 11 6854914 6857282 Vra7g0148 7 2464930 2468320 PCT