Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0119 ATGGAGTCATGTGTCCCACCTGGGTTTCGCTTCCACCCAACAGATGAAGAACTTGTGGGTTATTATCTCAGGAAAAAAGTTGCTTCTCAGAAGATTGATCTTGACGTTATCAAAGAGATCGACCTATATCGCATTGAACCATGGGATCTCCAAGAGAGATGCAGGATTGGGTATGAGGAGCAGAATGAGTGGTATTTCTTCAGTCATAAAGATAAAAAATATCCAACTGGGACAAGAACCAACAGAGCTACAATGGCAGGGTTTTGGAAGGCGACAGGAAGAGACAAATCAGTGTACGAAAGGACCAAACTTATTGGCATGAGAAAGACCCTTGTTTTCTACAAAGGAAGAGCCCCTAATGGACAGAAAACTGATTGGATCATGCACGAGTATAGGCTTGAAACTGTCGAGAATGGACCTCCACAGGAAGAAGGATGGGTTGTGTGCAGAGCATTCAGGAAAAGAACCAACGGTCAAACGAAGAGTATTGAAGGGTGGGATCGAAGGTACACATACGAGGATCCTATCGACCTTATGTTAAGGAAACCACAGCGGAACAATATTTCGGCTGAAAATTTGTTGTACAAGAAAGAGACAAGGTTGATGCATGCAGAAGAAGTGATGCAGCTTCCTGAGCTACAAAGTCCTTCCGTCACAATAATGAAGAAGCAAAGCTCAACATCAGACAACATTAACAATGAGAAGGAGTTATCGAAAGTGACCGATTGGAGGGCACTTGACAAGTTTGTGGCTTCTCAGTTGAGTCAAGAAGACAGGCATGAAATAGAAGGGATGTCAAGCTTTGCAGGTCTGACTGGGTCGGACATCCCATTCTTGCTACTCCAGAATACTAATGAAAGGAACAAGTTCAACCCCTTTCTAACTGCACCTTCATCAGACTGTGACATTGGGATATGTGTATTTCAAACTTAA 933 0.4319 MESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIKEIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYERTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLETVENGPPQEEGWVVCRAFRKRTNGQTKSIEGWDRRYTYEDPIDLMLRKPQRNNISAENLLYKKETRLMHAEEVMQLPELQSPSVTIMKKQSSTSDNINNEKELSKVTDWRALDKFVASQLSQEDRHEIEGMSSFAGLTGSDIPFLLLQNTNERNKFNPFLTAPSSDCDIGICVFQT* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0119 310 ProSiteProfiles NAC domain profile. 5 154 IPR003441 GO:0003677|GO:0006355
Vra7g0119 310 Pfam No apical meristem (NAM) protein 6 133 IPR003441 GO:0003677|GO:0006355
Vra7g0119 310 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 3 283 - -
Vra7g0119 310 Gene3D NAC domain 14 159 IPR036093 GO:0003677|GO:0006355
Vra7g0119 310 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 3 283 - -
Vra7g0119 310 SUPERFAMILY NAC domain 3 154 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0119 Vra-Chr7 2147960 2151502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0119 1 308 NAC Transcription Factor Family AT2G18060 57.104 1.48e-137 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vra7g0119 NAM 4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0119 - - gmx:100803726 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0761 11 6200155 6204459 Vra7g0119 7 2147960 2151502 PCT