Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0110 ATGGATATACTTATGCAACTGAAAACCGTAATCGAACCGTTCGGTACGACGGTCTTGCTCATAATTCTGGTGACGTTGGTACTGTGGGGTTTACTGTCTCGAATTCGCAGAAAAACGGCGCCGTATCCCCCGGGGCCTAAAGGCCTTCCCATCATAGGCAACATGAACATGATGGACCAGCTCACACACAGAGGCCTGGCCAAACTCGCCAAGCAATACGGCGGCGTTTTTCACCTCCGCATAGGGTTCCTCCCCATGGTTGCCATTTCAAACGCGGAAGCGGCACGTGAAGTGCTCCAAGTCCAGGACAACATATTCTCCAACCGCCCCGCCACCATAGCCATAAGGTACCTAACCTACGACCGCGCCGACATGGCTTTCGCTCACTACGGTCCCTTCTGGCGCCAGATGCGGAAAATCTGCGTCATCAAACTCTTCAGCCGCAAGCGCGCCGAGTCCTGGAACTCCGTCAGAGACGAAGTCGACACCATTGTCCGCACCGTTGCGGCGAATGTGGGGAACCCCGTTAACGTTGGGGAACTGGTGTTCAACCTCACGAAAAACATCATCTACCGCGCCGCTTTCGGGTCCAGTTCCCGACAGGGACAAGACAAGTTCATTTCAATTCTTCAGGAGTTTTCTAAGTTGTTTGGGGCCTTCAATATTGCGGACTTTGTGCCTTGTCTCGGGTGGGTTGATCCTCAGGGTCTGAACTTGAGACTCGTCAAGGCACGCGCCGCCTTGGATAGCTTCATTGATAACATCATTGAGGAGCACGTGGAGAAGAAGAGGAGCGGCAAGTGTTGTGAGGAAGAAAGTGACATGGTTGATGAGTTGCTGAATTTTTACAGCCAACACCCCAATTTCAGTAATCTATCAAACGACTTGCACAACTCCATCACACTCACCAAAGACAACATCAAAGCCATCATCATGGACGTGATGTTCGGAGGAACCGAAACTGTGGCATCAGGAATCGAGTGGGCAGTGGCGGAGCTAATGAGAAGCCCAGAAGACCTACGACGTGTGCAGCAAGAACTAGCCGATGTAGTGGGCCTGAACCGGCGCGTGGAGGAATCGGACCTCGAAAAGCTCGTCTTTCTGAAATGCGCGGTGAAGGAGGCACTGCGGATGCACCCGCCGATTCCGCTTCTCCTCCACGAGACGGCGGAGGAAGCGGTGGTTTGCGGGTACCACGTGCCAAAGGGTTCGCGCGTAATGATAAACGCGTGGGCCATAGGAAGGGACGGGGACTCGTGGGAGGAACCGGAAGCGTTCAAGCCGTCGCGGTTTCTAAACCCGAGTGTGCCGGATTTCAAAGGGAGCAACTTTGAGTTCATTCCGTTCGGGTCGGGTCGGAGATCCTGTCCCGGAATGCAACTGGGTCTTTACGCGCTGGAAATGGCCGTGGCGCATTTGCTTCACTGCTTCACGTGGGAGTTACCCGATGGGATGAAACCCAGCGAGTTGGACATGAGTGACGTGTTCGGACTCACCGCGCCCATGGCGAGTCGACTCGTGGCGATTCCATCGAAACGTGTGTTATGTCATGTATAA 1557 0.5408 MDILMQLKTVIEPFGTTVLLIILVTLVLWGLLSRIRRKTAPYPPGPKGLPIIGNMNMMDQLTHRGLAKLAKQYGGVFHLRIGFLPMVAISNAEAAREVLQVQDNIFSNRPATIAIRYLTYDRADMAFAHYGPFWRQMRKICVIKLFSRKRAESWNSVRDEVDTIVRTVAANVGNPVNVGELVFNLTKNIIYRAAFGSSSRQGQDKFISILQEFSKLFGAFNIADFVPCLGWVDPQGLNLRLVKARAALDSFIDNIIEEHVEKKRSGKCCEEESDMVDELLNFYSQHPNFSNLSNDLHNSITLTKDNIKAIIMDVMFGGTETVASGIEWAVAELMRSPEDLRRVQQELADVVGLNRRVEESDLEKLVFLKCAVKEALRMHPPIPLLLHETAEEAVVCGYHVPKGSRVMINAWAIGRDGDSWEEPEAFKPSRFLNPSVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALEMAVAHLLHCFTWELPDGMKPSELDMSDVFGLTAPMASRLVAIPSKRVLCHV* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0110 518 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0110 518 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0110 518 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0110 518 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0110 518 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0110 518 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0110 518 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0110 518 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0110 518 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0110 518 Pfam Cytochrome P450 43 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0110 518 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 15 517 - -
Vra7g0110 518 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0110 518 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0110 518 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0110 518 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0110 518 Gene3D Cytochrome P450 35 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0110 518 SUPERFAMILY Cytochrome P450 43 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0110 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Vra7g0110 518 PANTHER CYTOCHROME P450 84A1-RELATED 15 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0110 Vra-Chr7 2038365 2041723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0110 50 516 Monolignol Biosynthesis Gene Families AT4G36220 72.399 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0110 K09755 - gmx:100807448 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0750 11 6085677 6089523 Vra7g0110 7 2038365 2041723 PCT