Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0096 ATGTCAACGGAAGCGCCCAAGCCCCATAAATGGCAGTGGGAGAATGCCACTGCGGGCGCTGCCGCCGGATTCGCCACCGTTGCCGTTATGTATCCCCTCGATGTTGTCCGCACTAGGTTCCAAGTTAATGATGGTCGAGTTTCTCATCTTCCCAGTTACAAGAACACTGCTCACGCCGTTTTCACCATTGCGCGCTCTGAGGGATTAAGAGGGTTATATGCAGGCTTTCTTCCTGGGACTCTCGGGTCCACTATTTCGTGGGGTTTATATTTCTTTTTCTATGATAAAGCCAAACAAAGATATGCAAGGAACGGGGAAGGGAAATTGAGCCCAGGTCTTCATCTTGCCTCAGCTGCTGAAGCAGGAGGTTTGGTTTGCCTGTGCACAAATCCTGTTTGGCTTGTAAAGACAAGATTGCAGCTTCAAAGTCCGCTTCATCAGACGCGACCATACTCTGGGCTTTATGATGCATTTAGGACCATAACGAGGGAAGAGGGATTTAGTGCACTTTACAGAGGCATTGTTCCTGGTCTATTTCTGCAGGTCTCTCATGGTGCTATTCAGTTCACAGCATACGAGGAGCTCCGTAAAGTTATTATTGATTTTAAGAGTAAGAGAAGTACATTCCATAATGACAATCCTGATAAGTTATTGAATTCTCTCGATTATGCTGTTCTTGGAGCAACATCAAAACTGGCTGCAATACTGCTAACCTATCCATTTCAGGTTATGCGGTCTCGCTTGCAGCAACGACCAAGTGGTGATGGGGTCCCAAGATATATGGATACTTGGCATGTTGTGAAAGAAACTGCACGAGTTCTAGGACTTTGA 831 0.4645 MSTEAPKPHKWQWENATAGAAAGFATVAVMYPLDVVRTRFQVNDGRVSHLPSYKNTAHAVFTIARSEGLRGLYAGFLPGTLGSTISWGLYFFFYDKAKQRYARNGEGKLSPGLHLASAAEAGGLVCLCTNPVWLVKTRLQLQSPLHQTRPYSGLYDAFRTITREEGFSALYRGIVPGLFLQVSHGAIQFTAYEELRKVIIDFKSKRSTFHNDNPDKLLNSLDYAVLGATSKLAAILLTYPFQVMRSRLQQRPSGDGVPRYMDTWHVVKETARVLGL* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0096 276 Gene3D Mitochondrial carrier domain 2 103 IPR023395 -
Vra7g0096 276 PRINTS Mitochondrial carrier protein signature 25 43 IPR002067 GO:0055085
Vra7g0096 276 PRINTS Mitochondrial carrier protein signature 73 91 IPR002067 GO:0055085
Vra7g0096 276 SUPERFAMILY Mitochondrial carrier 11 272 IPR023395 -
Vra7g0096 276 ProSiteProfiles Solute carrier (Solcar) repeat profile. 218 276 IPR018108 -
Vra7g0096 276 Gene3D Mitochondrial carrier domain 104 276 IPR023395 -
Vra7g0096 276 Pfam Mitochondrial carrier protein 109 200 IPR018108 -
Vra7g0096 276 Pfam Mitochondrial carrier protein 11 103 IPR018108 -
Vra7g0096 276 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 198 IPR018108 -
Vra7g0096 276 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 275 IPR044712 GO:0006862|GO:0055085
Vra7g0096 276 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Vra7g0096 276 PANTHER BNAA09G07970D PROTEIN 10 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0096 Vra-Chr7 1756708 1769308 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0096 32 251 Chloroplast and Mitochondria Gene Families AT2G47490 39.207 1.82e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0096 K15115 - gmx:100809599 482.256