Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0082 ATGTTGAATCTGTTGATGATAGTGCAGAACTGTTACCACATAATCTTGGTCGCATTATTGACTATAGGAGTAACATATTTGGCTTCAAAAGCATGGAAGAGAGCTACAACAAACCAAAGAGAAGAGATTCCTGGAAGGTTGGGACTGCCTTTTCTTGGGGAAACTCTTGCTTTTCTTTCAGCCACTAATAGCACAAGGGGATGCTATGATTTTGTCAGACTTAGGCGATTGTGGAATGGGAGATGGTTCAAGACAAGGCTATTTGGGAAGATTCACATATTTGTTCCTAATCCAGAAGGAGCAAGGACCATATTTGCCAATGACTTTGTACTGTTCAACAAGGGTTACGTGAAATCAATGGCAGATGCCGTGGGAGAGAAAAGCTTATTATGTGTACCCGTTGAGAGTCACAAAAGAATAAGGCGTCTTCTATCAGAACCATTTTCCATGACTTCCCTATCCGCATATGTCACCAAATTTGACAAACTGTTGTGTGGAAGGCTACAAAAGCTAGAAGAAACCGGGAAAAGTTTCAAGGTGTTGAACTTTTCTATGAAGATGACATTCGATGCAATGTGTGATATGCTGATGAGCATCACGGAGGATTCATTACTACGACAGATCGAAGAAGACTGCAACGCCGTCTCTGACGCCATGTTATCCATTCCCATCATGATTCCTGGTACCAGATACTATAAAGGCATCACGGCTCGTAAAAGGCTCATGGAGACCTTCAGAGAGATCATTGCCAGACGTAGGAGGGGAGAAGAAACTCGAGAGGACTTTCTTCAGTCCATGTTGCAGAGAGACTCACTCCCACCCAGTGAAAAACTTGATGACTCGGAAATAATGGATAACCTGCTGACATTGATAATTGCTGGACAAACGACCACGGCAGCGGCAATGATGTGGAGTGTAAAGTTTCTACATGACAACAGAGAAGCACAGGACATACTCAGGGAAGAACAGTTATCCATAACCAACATGAAACCAGACGGAGCTTCACTTAACCATGAAGATCTAAACAACATACGTTATGGTTTGAAGGTAGTCAAGGAAACATTGAGAATGTCCAATGTCCTGCTATGGTTTCCTCGTGTTGCACTTCAAGACTGCACGATCGAAGGGTATGACATAAAGAAAGGTTGGCATGTTAACATCGATGCAACTTACATACATCATGACTCTGATTTGTACAATGATCCGTTGAAATTCAACCCACAAAGATTTGATGAACATCAAAAGCCATACAGTTTCATACCTTTCGGATCAGGGCCTAGGACATGCCTTGGGATCAATATGGCAAAAGTGACAATGTTAGTCTTTTTACACAGGCTTGCTGGTGGTTATACGTGGACCCTTGATGATTTAGACACTTGCTTAGAAAAGAAGGCACACATACCTAGGCTAAGGAGCGGTTGCCCAATAACTTTGAAGTCCTTGAGCAAAACTATGCTAGAGTCATAA 1467 0.424 MLNLLMIVQNCYHIILVALLTIGVTYLASKAWKRATTNQREEIPGRLGLPFLGETLAFLSATNSTRGCYDFVRLRRLWNGRWFKTRLFGKIHIFVPNPEGARTIFANDFVLFNKGYVKSMADAVGEKSLLCVPVESHKRIRRLLSEPFSMTSLSAYVTKFDKLLCGRLQKLEETGKSFKVLNFSMKMTFDAMCDMLMSITEDSLLRQIEEDCNAVSDAMLSIPIMIPGTRYYKGITARKRLMETFREIIARRRRGEETREDFLQSMLQRDSLPPSEKLDDSEIMDNLLTLIIAGQTTTAAAMMWSVKFLHDNREAQDILREEQLSITNMKPDGASLNHEDLNNIRYGLKVVKETLRMSNVLLWFPRVALQDCTIEGYDIKKGWHVNIDATYIHHDSDLYNDPLKFNPQRFDEHQKPYSFIPFGSGPRTCLGINMAKVTMLVFLHRLAGGYTWTLDDLDTCLEKKAHIPRLRSGCPITLKSLSKTMLES* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0082 488 Pfam Cytochrome P450 49 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0082 488 PRINTS E-class P450 group I signature 31 52 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0082 488 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0082 488 PRINTS E-class P450 group I signature 302 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0082 488 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0082 488 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0082 488 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0082 488 SUPERFAMILY Cytochrome P450 40 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0082 488 PANTHER CYTOCHROME P450 FAMILY PROTEIN 16 481 - -
Vra7g0082 488 Gene3D Cytochrome P450 32 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0082 488 PANTHER CYTOCHROME P450 26 16 481 - -
Vra7g0082 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Vra7g0082 488 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0082 488 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0082 488 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0082 488 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0082 Vra-Chr7 1642536 1646480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0082 44 453 Cytochrome P450 AT1G19630 46.747 2.22e-125 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0082 - - gmx:100789430 894.034