Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0062 ATGGCGTCAATTTCTGATAGTCTTCCTCGATTTCTGGAAACTATTGAGGTGTATATCTCAGCTGATAAAATGGTTAATGGAGAAGTTGATTGGTACAGGATCCTTGGTGTGCAACCCTTGGCTGATGAAGAAACAATTCGAAGACGATATAGGAAATTGGCTCTTACTCTGCATCCTGATAAAAATAAATCTGTAGAAGATGGCTCCAAGACCTCCCCCTCAACCAGCCGATCGGGATTCCTCGAGCAACAACAACTTGTTGGAATCGGTCATTCAAGCCCTCCAACAACAAAATGCCACATTAACCCAGTAGAACACTATTGCCCTGCAGAGTCTGGAAGCCGCTCGGGTATCAACCGAGAACACCCAGTGACAAATGATGGAGATGATGCAGAGTAG 399 0.4486 MASISDSLPRFLETIEVYISADKMVNGEVDWYRILGVQPLADEETIRRRYRKLALTLHPDKNKSVEDGSKTSPSTSRSGFLEQQQLVGIGHSSPPTTKCHINPVEHYCPAESGSRSGINREHPVTNDGDDAE* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0062 132 CDD DnaJ 30 67 IPR001623 -
Vra7g0062 132 MobiDBLite consensus disorder prediction 68 99 - -
Vra7g0062 132 SMART dnaj_3 29 86 IPR001623 -
Vra7g0062 132 PANTHER BNAC03G44070D PROTEIN 6 68 - -
Vra7g0062 132 ProSiteProfiles dnaJ domain profile. 30 97 IPR001623 -
Vra7g0062 132 PANTHER HEAT SHOCK PROTEIN-LIKE 6 68 - -
Vra7g0062 132 PRINTS DnaJ domain signature 32 50 IPR001623 -
Vra7g0062 132 PRINTS DnaJ domain signature 50 65 IPR001623 -
Vra7g0062 132 SUPERFAMILY Chaperone J-domain 21 66 IPR036869 -
Vra7g0062 132 Gene3D DnaJ domain 16 85 IPR036869 -
Vra7g0062 132 MobiDBLite consensus disorder prediction 57 132 - -
Vra7g0062 132 Pfam DnaJ domain 30 66 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0062 Vra-Chr7 1384731 1386267 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0062 10 63 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.000 1.78e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0062 - - vra:106765913 271.937