Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0049 ATGAGAAGAGAAGAAAGTAGAAAGAATCAGACAGGCTACTCCATGTCAGACTCACATCTGACTTTCTGTTTTCTTTCTTCCATCCTTGCTCTTATAGTCATCACCTTCATTTTCACCAAAAGAAAGAAACCAACCCTTAATCTTCCCCCTGGCCATACGGGGTGGCCCCTCCTTGGGGAAACCATAGGGTATTTGAGGACTTACCAAGCTCGTACACTGGGAGAGTTTATGGAGAAGCACATAGCAAGGTATGGAAATATTTACAGGTCAAACTTGTTTGGGGAGCCAGCCATAGTGTCAGCAGATGCAGGGCTGAATAGGTTCATAATGCAGAACGAAGGGAAGTTGTTCGAGGCTAGTTATCCTAAGAGCCTCGGTGGAGTACTTGGAAAATGGTCTATGTTGGTCATAGTAGGAGACATGCACAGAGACATGAGGAACATATCACTCAACTTTCTCAGCTATTCCAGGGTCCGAAATCATCTTTTCAAAGACATCGATTACCATGCCCGTCGTGTTATTTTCTCCTGGAAACATAATTCTACATTATCAGCTCAAAAAGAAGCAAGAAGGTTCACCTTCAATTTAATGGCGAAACAAATCATGAGTTTGGACCCTGGTAAACCGGAGACAGAACAATTGGAGACAGAATACGTCTCTTTCATGAAGGGTGTTGTATCTCTTGTTCCTTTGAATTTGCCCGGAACAGCATACAGAAAGGCATTAAAGGCTAGGTCCACCATTCTGAAGTTCATAGAGGCGAAAATGGAAGAGAGGGCGAAGAGGGTCCAGAAGGGTGAGGCAGTGGAGGAAGAAAATGATCTTCTAAACTGGGTTGTGACTCATACAAACCTTTCAAATGAGCAAATACTTGACTTGATATTGAGCTTGCTCTTTGGCGGCCATGAAACCTCGTCGGTAGCCATAGCTCTAGCTATTTACTTCTTGCCTGGTTGTCCTCGAGCTATGCAACAATTGAGGGAGGAACACGTGGAAATAGTCACTTCGAAGAAGAAGACAGGGGAGGTTGAATTGACTTGGAATGATTACAAAAAAATGGAGTTTACTCACTGTGTTTTGAACGAAACACTTCGACTAGGGAATGTTGTGAGGTATCTTCACAGGAAGGCTATTAAGGATGTTCGGTACAAAGGTTATGACATTCCACGTGGGTGGAAAGTTCTTCCGGTGATTTCAGCTGCACATTTCGATCCTCAACACTTTGACCAACCTCACCAATTCAATCCATGGAGATGGCAGGGGAGTAATGGTAAAGCTGATAATAACTTCATGCCATTTGGAGGAGGATCAAGGTATTGTGCAGGGTCAGAGTTAGCGAAGGTGGAAATGGCGGTGTTCATCCACCATCTGATTCTGAACTACGACTGGGAACTTCTGGAAGGTGATGAACCTTTTGTATACCCTTATGTGGATTTCCCCAAAGGTCTACCCATCAAAGTCCAAGCTACATCATCCATCTAA 1482 0.4386 MRREESRKNQTGYSMSDSHLTFCFLSSILALIVITFIFTKRKKPTLNLPPGHTGWPLLGETIGYLRTYQARTLGEFMEKHIARYGNIYRSNLFGEPAIVSADAGLNRFIMQNEGKLFEASYPKSLGGVLGKWSMLVIVGDMHRDMRNISLNFLSYSRVRNHLFKDIDYHARRVIFSWKHNSTLSAQKEARRFTFNLMAKQIMSLDPGKPETEQLETEYVSFMKGVVSLVPLNLPGTAYRKALKARSTILKFIEAKMEERAKRVQKGEAVEEENDLLNWVVTHTNLSNEQILDLILSLLFGGHETSSVAIALAIYFLPGCPRAMQQLREEHVEIVTSKKKTGEVELTWNDYKKMEFTHCVLNETLRLGNVVRYLHRKAIKDVRYKGYDIPRGWKVLPVISAAHFDPQHFDQPHQFNPWRWQGSNGKADNNFMPFGGGSRYCAGSELAKVEMAVFIHHLILNYDWELLEGDEPFVYPYVDFPKGLPIKVQATSSI* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0049 493 PANTHER CYTOCHROME P450 26 31 467 - -
Vra7g0049 493 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0049 493 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0049 493 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0049 493 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0049 493 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0049 493 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0049 493 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0049 493 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0049 493 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0049 493 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0049 493 Pfam Cytochrome P450 49 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0049 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Vra7g0049 493 Gene3D Cytochrome P450 37 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0049 493 SUPERFAMILY Cytochrome P450 46 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0049 493 PANTHER CYTOCHROME P450 90B1 31 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0049 Vra-Chr7 1170292 1174004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0049 40 425 Cytochrome P450 AT3G50660 66.585 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0049 K09587 - gmx:100800210 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0683 11 5500324 5504198 Vra7g0049 7 1170292 1174004 PCT