Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0041 ATGAGAGTTCCCTCATCCCAACAGCCTAATACCCATTCTCCCAATCCAAACCTCCTCCTCCACACCACCACCACCACCAACACCACCAACCCCACCTTCACCTACGAACCCACCTCCGTCCTCGACCTCTGCCGCAGCCCCAGTCCCGAAAAGAAACCAACTGTCCCAAAGCCAGAACCTCAACATAACCTCACCACCACTACCACCAACACCACAACCAATACCAACAACACCCTAGACCTGGACGATCATGTCTTGCCAAATTCCGATTGGTGGGAGTCCATCATGAAGGACCTAGCCTTACCCGAAGATTCTCCCACAACCATCTCCAAGCCTAACAACATCAATCCATGCATCCCTGATTTTCCACCTTCTCATGACCCACCCTTTGATCACCCTCCTGACTTCACCTCGCTTTCAGAAATTTACAACCAAAACCTCCCTTACAACTACAGCACCACCAACCCTTTGGACCATTCCTTTCACGACCTCAACCACCACCACAACCCCACCATCAACGTTAACAACTGGGACTTCATCGAAGAGCTTATCCGCGCCGCCGATTGCTTCGACAGCAGTCACTTCCAACTCGCTCAAGCCATACTCGAACGCCTCAACACCCGCCTCATTCGCTCACCCATGGCCAAGCCGCTCCACCGAGCCGCGTTTCACTTCAAAGATGCTCTCCATTCCATTCTCTCCGGTTCCAACCGCGCGGCTTCCAACCGCCTCTCCTCCATGGCCGAGATTGTTCAAACCATCAAAACTTTCAAGGCCTTCTCGGGAATCTCTCCCATCCCAATGTTCTCTATCTTCACCACCAACCAGGCCTTGCTAGAAACCCTAAACGGATCCTCCTTCGTTCACGTCATCGATTTCGAAATCGGGCTCGGGATCCAATACGCCTCTCTCATGAAAGAGATCGCGGAGAAGGCCGCGGGCGCTTCGCTGCTCCTCCGCATCACGGCAGTCGTGCCAGAGGAGTACGCCGTGGAGAGCCGCCTCGTCCGCGAGAATCTCAACCAATTTGCGCATGACCTCGGGATCCGCGTTCAGGTGGACTTCGTCCCGCTTCGGACCTTCGAGGCGGTGTCATTCAAGGCGGTAAGGTTCGTCGACGGCGAGAAGATCGCAGTGCTGCTGTCGCCGGCGATCTTTTGCCGCCTCGGATCCATTGGCGCCAGCGTCGGCGCGTTCCTCGCCGACGTGAGGAGGATGGCGCCCGGAGTGGTAGTGTTCGTGGACGGCGAGGGGTGGACGGAGGCTACCGCTGCAGCCTCTTTTCGGCGAGGCGTAGTGAACAGCTTGGAATTTTACTCCATGATGCTGGATTCCCTGGATGCGTCTGTGGCGGCCGGGGGAGGCGGCGAGTGGGTGAGGAGGATCGAGATGCTTCTACTGCGGCCAAAGATCTTCGCAGCGGTGGAAAGCGCAAGGAGGAGGTCACCACCGTGGAGGGAGGCATTTTACGGCGCCGGAATGAGGCCAGTGCAGCTGAGCCAGTTCGCCGATTATCAAGCGGAGTGTTTGCTGGCGAAGGTGCAAATCAGAGGGTTCCACGTGGAAAAACGACATGCCGAATTGGTGCTCTGCTGGCACGAACGAGCCATGGTTGCCACGTCAGCTTGGCGGTGCTAG 1638 0.5672 MRVPSSQQPNTHSPNPNLLLHTTTTTNTTNPTFTYEPTSVLDLCRSPSPEKKPTVPKPEPQHNLTTTTTNTTTNTNNTLDLDDHVLPNSDWWESIMKDLALPEDSPTTISKPNNINPCIPDFPPSHDPPFDHPPDFTSLSEIYNQNLPYNYSTTNPLDHSFHDLNHHHNPTINVNNWDFIEELIRAADCFDSSHFQLAQAILERLNTRLIRSPMAKPLHRAAFHFKDALHSILSGSNRAASNRLSSMAEIVQTIKTFKAFSGISPIPMFSIFTTNQALLETLNGSSFVHVIDFEIGLGIQYASLMKEIAEKAAGASLLLRITAVVPEEYAVESRLVRENLNQFAHDLGIRVQVDFVPLRTFEAVSFKAVRFVDGEKIAVLLSPAIFCRLGSIGASVGAFLADVRRMAPGVVVFVDGEGWTEATAAASFRRGVVNSLEFYSMMLDSLDASVAAGGGGEWVRRIEMLLLRPKIFAAVESARRRSPPWREAFYGAGMRPVQLSQFADYQAECLLAKVQIRGFHVEKRHAELVLCWHERAMVATSAWRC* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0041 545 MobiDBLite consensus disorder prediction 1 41 - -
Vra7g0041 545 Pfam GRAS domain family 180 544 IPR005202 -
Vra7g0041 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 544 IPR005202 -
Vra7g0041 545 PANTHER SCARECROW-LIKE PROTEIN 15 7 544 - -
Vra7g0041 545 MobiDBLite consensus disorder prediction 1 81 - -
Vra7g0041 545 ProSiteProfiles GRAS family profile. 170 544 IPR005202 -
Vra7g0041 545 MobiDBLite consensus disorder prediction 59 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0041 Vra-Chr7 1045158 1047442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0041 79 544 GRAS Transcription Factor Family AT4G36710 51.935 3.49e-157 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vra7g0041 GRAS 3e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0041 - - gmx:100785004 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0661 11 5298499 5300646 Vra7g0041 7 1045158 1047442 PCT