Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0038 ATGGGGGCTGGGGAAGAGAGCACAACTAAACCTCCAAAGTCATCTTCATCAGTTCAGGAGACACCAACAGTGCCTGCATATCCTGATTGGTCAAGCTCCATGCAGGCCTATTATTCTCCTGGAGCCACTCCACCCCCCTTTTTTGCCTCAACTGTTGCTTCCCCAACTCCCCATCCCTTTTTATGGGGAAGCCAGCATCCCTTGATGCCGCCATATGGGACTCCAGTCCCATATCCAGCTTTATATCCTCCTGGGAGTATCTATCCTCATCCAAGCATGGCAGTGACTCCGAGTGCTATCCAGCAAAGTACGGAGATTGAAGGGAAGGGAGCTGATGGAAAGGATCGAGACTCGTCCAAAAAATTGAAAGGAACTTCTGCAAATACAGGTTCCAAAGCAGGAGAGAGTGGAAAGGCAGGCTCAGGTTCAGGCAATGATGGCATGTCGCAAAGTGGTGAAAGTGGTTCGGAGGGTTCATCAAATGCCAGTGATGAGAATACTAACCAACAGGAATCAGCTACAAACAAGAAGGGAAGCTTTGACCTGATGCTTGTGGATGGAGCCAATGCCCAGAACAATTCTGCGGGTGCCATTTCTCAATCTTCTGTGCCTGGAAAGCCTGTTGTCTCAATGCCAGCTACTAATCTTAATATTGGAATGGACTTATGGAACCCCTCATCTGGTGGTGCAGAAGCTGCAAAAATGAGACATAATCAATCCGGTGCCCCAGGAGTTGTTGCCCTTGGTGAACAATGGATACAAGATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCGAACAGAGAGTCAGCTAGGAGGTCAAGGTTACGCAAGCAGGCTGAGTGCGAAGACTTACAAAAGAGGGTGGAGACACTGGGAAGTGAGAATCGAAAACTCAGAGAAGAGCTTCAGAGACTTTCTGAAGAATGCGAGAAGCTTACATCTGAAAATAATTCAATCAAGGAAGAGTTGGAACGGATGTGTGGGCCAGAAGCAGTTGCTGACCTTGGATGA 1017 0.4808 MGAGEESTTKPPKSSSSVQETPTVPAYPDWSSSMQAYYSPGATPPPFFASTVASPTPHPFLWGSQHPLMPPYGTPVPYPALYPPGSIYPHPSMAVTPSAIQQSTEIEGKGADGKDRDSSKKLKGTSANTGSKAGESGKAGSGSGNDGMSQSGESGSEGSSNASDENTNQQESATNKKGSFDLMLVDGANAQNNSAGAISQSSVPGKPVVSMPATNLNIGMDLWNPSSGGAEAAKMRHNQSGAPGVVALGEQWIQDERELKRQKRKQSNRESARRSRLRKQAECEDLQKRVETLGSENRKLREELQRLSEECEKLTSENNSIKEELERMCGPEAVADLG* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0038 338 MobiDBLite consensus disorder prediction 258 282 - -
Vra7g0038 338 MobiDBLite consensus disorder prediction 1 30 - -
Vra7g0038 338 CDD bZIP_plant_GBF1 261 311 IPR045314 GO:0003700|GO:0006355
Vra7g0038 338 MobiDBLite consensus disorder prediction 309 330 - -
Vra7g0038 338 MobiDBLite consensus disorder prediction 108 122 - -
Vra7g0038 338 SMART brlzneu 256 320 IPR004827 GO:0003700|GO:0006355
Vra7g0038 338 MobiDBLite consensus disorder prediction 44 243 - -
Vra7g0038 338 Pfam G-box binding protein MFMR 1 93 IPR012900 -
Vra7g0038 338 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 337 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vra7g0038 338 Gene3D - 259 313 - -
Vra7g0038 338 Coils Coil 269 324 - -
Vra7g0038 338 MobiDBLite consensus disorder prediction 70 86 - -
Vra7g0038 338 SUPERFAMILY Leucine zipper domain 259 315 IPR046347 GO:0003700|GO:0006355
Vra7g0038 338 MobiDBLite consensus disorder prediction 8 30 - -
Vra7g0038 338 MobiDBLite consensus disorder prediction 123 177 - -
Vra7g0038 338 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 263 278 IPR004827 GO:0003700|GO:0006355
Vra7g0038 338 Pfam bZIP transcription factor 256 318 IPR004827 GO:0003700|GO:0006355
Vra7g0038 338 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 258 321 IPR004827 GO:0003700|GO:0006355
Vra7g0038 338 PANTHER G-BOX-BINDING FACTOR 1 1 337 - -
Vra7g0038 338 MobiDBLite consensus disorder prediction 186 208 - -
Vra7g0038 338 MobiDBLite consensus disorder prediction 309 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0038 Vra-Chr7 1009773 1015431 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0038 1 337 bZIP Transcription Factor Family AT4G36730 54.094 6.25e-108 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vra7g0038 MFMR 2.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0038 K09060 - gmx:778124 582.022