Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0032 ATGACAAACAACTCCATGCCAATCTCAGTCTGCGGAGACTCAGATTGCGAATCCTCTTGGGACCACCAAACTAGCTCCTCTCATTGTCCTCACCTTCCATCGCTACCACCACCGACCATAAACCAACAATGGCAGAATCTCCCTCTTGCTACTCCACCCTCCAAGAAGCCACGTGGCAGACCTCCAGGCTCCAAGAACAAGCCCAAATACACTCTCCCACAACCCTCCATCAAGATTCTCATTGTCAATGTCGCTCCAGGACATGACATCATTGAAACCATTATTAACATCGCTCGCCGCTCCCATGTCAGCCTCTCCATCCTTAGTGCATCCGGTATCATCACCACCGTCACCCTCCGCCATGTCCCCAGTGGTTCCTCCGCCGTCATGCTCCATGGACCCTTCAACTTACTTTCCCTCACTGGCTCCTACTTACACAATAACCAATACACCCTTCTCCCCGGAGCCACCCCTCCTCGTTCCTTATCCTTTGGGATACACCTCTCCACCTCTCACGGTCGAGTCTTCGGTGGCCTCGTCGGCGGTAGAGTCATCGCCGGTGACGATGTCAACTTGACTATTTCTACCTTCGAGAACCCTGAAATTTATAAATACGGTTTTGAAGATCAAGAAAGAGGTGATCATGATGACAGTAACATCAACAACAATAAAACTTGTAACCATAACCCTAGTAATTTCAACATGGGTGGCGACTTGCCAACGTTGAACTCTGCTAATTTCGGTATCCATGGGTGGTGA 759 0.498 MTNNSMPISVCGDSDCESSWDHQTSSSHCPHLPSLPPPTINQQWQNLPLATPPSKKPRGRPPGSKNKPKYTLPQPSIKILIVNVAPGHDIIETIINIARRSHVSLSILSASGIITTVTLRHVPSGSSAVMLHGPFNLLSLTGSYLHNNQYTLLPGATPPRSLSFGIHLSTSHGRVFGGLVGGRVIAGDDVNLTISTFENPEIYKYGFEDQERGDHDDSNINNNKTCNHNPSNFNMGGDLPTLNSANFGIHGW* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0032 252 MobiDBLite consensus disorder prediction 1 30 - -
Vra7g0032 252 Gene3D - 76 217 - -
Vra7g0032 252 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 224 IPR014476 GO:0003680
Vra7g0032 252 SUPERFAMILY AF0104/ALDC/Ptd012-like 76 202 - -
Vra7g0032 252 Pfam Plants and Prokaryotes Conserved (PCC) domain 79 199 IPR005175 -
Vra7g0032 252 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24 224 - -
Vra7g0032 252 ProSiteProfiles PPC domain profile profile. 73 221 IPR005175 -
Vra7g0032 252 CDD DUF296 78 187 IPR005175 -
Vra7g0032 252 MobiDBLite consensus disorder prediction 209 228 - -
Vra7g0032 252 MobiDBLite consensus disorder prediction 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0032 Vra-Chr7 850132 850890 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0032 55 212 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.940 5.87e-25 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0032 - - pvu:PHAVU_006G013800g 366.311