Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0031 ATGGCAGCGTGCTTGAATCCACCTAGGCTATCTAGCACAGAAGATGACTCCGTGATACTCTTCTCAACTTCTAATTCTCCTGAGGAATCCATTAGTGCTTCTTCTTCCTCTTTCCACCACTCACCGCCACCATCACAGCAACAATTCAGAACTGCATATAAACTTTCTGTGAGAAATCTCTCCTACACTCTGCAGCCTAACAAGAGAACTTTCCTTTCATTTTGTCACCAGAGTAAAAACCCGGAGCCCTTGAGTATACTCAACTCAATCTCTTTTGTTGCCAGAAGGTCTGAGATTGTTGCTGTGGCTGGTCCTAGTGGAACAGGAAAGTCTACCCTTCTGCGAATCATGGCAGGAAGGGTAAAAGATGAAGACTTTGATCCTAAAAGTATTTCAATCAATGATCAGCCTATGACTAGTCCAGCTCAGTTGAGAAAGACATGCGGCTTTGTGGCACAAGAGGACAATTTGCTTCCTATGCTGACTGTGAGAGAAACTTTGTTGTTTAGTGCAAAGTTTAGGCTAAAAGAAATGACCCCTAAAGATAGAGAGTTAAGGGTAGAAAGCTTGTTGCAAGAGCTAGGACTTTTACATGTTGCTGATAGTTTTGTTGGGGATGAAGATATTAGAGGGATATCTGGTGGAGAGAGGAAAAGGGTGTCAATTGGAGTTGACATGATTCACAATCCTCCAATTTTGCTCCTAGATGAGCCAACTTCAGGTCTAGACAGCACTTCAGCTTTGCAAGTCATTGAGTTACTTTCATCAATTGTTAAAGCAAATCATAGGATAGTGGTTCTTTCAATCCACCAACCCAGCTATAGAATATTGCAGTATGTTTCCAAGTTCTTGATCCTCTCTCATGGTTCAGTTGTTCACAATGGTAGCCTAGAACAACTAGAGGAAACCATAAGTAAACTGGGATTTCAAATCCCAAAGCAGCTGAATGCTTTAGAATTCTCTATGGAAATTATACGAGGGTTGGAAGATTCCAGTTCCAAATATGAATCTTCCATCATTGAGGAAAAGGAGCCATTTCAACACCTCCTGTGGCCAGAGGAAGAAAACTGTGGTGGAGTCCAAATTGTCCAATCACAGTTTACCAAGGAAAGTTTTAGCAGTCTTTGCTATGCATACTTGATAGAGATACTGGTTTTGTGCTCAAGATTTTGGAAGATCACTTATAGAACAAAACAACTTTTCTTGGCCAGAACAATGCAAGCACTAGTTGGTGGCTTTGGTCTAGGAAGTGTTTATATAAAGGTAAGAAGGGATGAAGGAGGAATTGCAGAAAGGTTAGGTCTATTTGCATTCAGTCTTAGTTTTCTCCTCTCTTCTACAGTTGAAGCACTTCCAATATACCTTCAAGAGAGGAGTGTTTTGATGAAAGAAGCCTCAAGGGGAGCCTATAGGATTTCCTCTTACATGATAGCCAACACTTTTATTTTCCTTCCTTTCTTGTTTGTGGTATCCACACTTTTTGCTGTTCCAGTGTACTGGCTTGTAGGCCTCAACCCTTCTCTTTCAGCCTTCACCTTCTTCACTTTTGTGGTGTGGCTAATTGTGCTCATGGCAAGTTCTCTTGTGCTCTTCTTAAGTGCAGTGTCTCCTGATTTCATTTCAGGGAACTCTCTCATCTGCACAGTTCTTGGAGCCTTCTTCCTCTTCTCAGGATACTTCATTCCAAAGGAGAGCATCCCAAAGTATTGGCTTTTCTTGTACTATGTGTCCCTCTATAGGTACCCTTTGGATGCACTCCTCACAAATGAGTACTGGAATGTTAGAAATGAGTGCTTCTCTCATCAAATAGAAGGATCACAGTGCTTGATCACAGGGTTTGATGTGTTGAAGAGTAGAGGACTTGAAAGGGATAACAGGTGGATCAATGTGGGCATAATGCTGGCATTCTTTCTATTGTATCGTGTGCTTTGTTGGATAATTCTTGCAAGAAAGGCCTCCAAAACAACAATATAA 1974 0.4144 MAACLNPPRLSSTEDDSVILFSTSNSPEESISASSSSFHHSPPPSQQQFRTAYKLSVRNLSYTLQPNKRTFLSFCHQSKNPEPLSILNSISFVARRSEIVAVAGPSGTGKSTLLRIMAGRVKDEDFDPKSISINDQPMTSPAQLRKTCGFVAQEDNLLPMLTVRETLLFSAKFRLKEMTPKDRELRVESLLQELGLLHVADSFVGDEDIRGISGGERKRVSIGVDMIHNPPILLLDEPTSGLDSTSALQVIELLSSIVKANHRIVVLSIHQPSYRILQYVSKFLILSHGSVVHNGSLEQLEETISKLGFQIPKQLNALEFSMEIIRGLEDSSSKYESSIIEEKEPFQHLLWPEEENCGGVQIVQSQFTKESFSSLCYAYLIEILVLCSRFWKITYRTKQLFLARTMQALVGGFGLGSVYIKVRRDEGGIAERLGLFAFSLSFLLSSTVEALPIYLQERSVLMKEASRGAYRISSYMIANTFIFLPFLFVVSTLFAVPVYWLVGLNPSLSAFTFFTFVVWLIVLMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKESIPKYWLFLYYVSLYRYPLDALLTNEYWNVRNECFSHQIEGSQCLITGFDVLKSRGLERDNRWINVGIMLAFFLLYRVLCWIILARKASKTTI* 658
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0031 657 Pfam ABC-2 type transporter 270 338 IPR043926 GO:0140359
Vra7g0031 657 ProSitePatterns ABC transporters family signature. 212 226 IPR017871 GO:0005524
Vra7g0031 657 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 650 - -
Vra7g0031 657 Pfam ABC-2 type transporter 383 591 IPR013525 GO:0016020|GO:0140359
Vra7g0031 657 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 313 IPR003439 GO:0005524
Vra7g0031 657 Pfam ABC transporter 87 240 IPR003439 GO:0005524
Vra7g0031 657 Gene3D - 70 343 IPR027417 -
Vra7g0031 657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 307 IPR027417 -
Vra7g0031 657 SMART AAA_5 96 283 IPR003593 -
Vra7g0031 657 PANTHER ABC TRANSPORTER G FAMILY MEMBER 23 3 650 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vra7g0031 Vra-Chr7 834091 836409 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0031 84 300 Calmodulin-binding Proteins AT2G36910 28.507 1.67e-12 68.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0031 K05681 - gmx:100783883 1096.26