Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0014 ATGGTTGAATCTGATATTGTGTTTCCATCATCCTCTTCTCTTTCTTCTTTTGACCACTCCACTGATACTGATAGTGTTGCTGGTTCACCCTCTCTGCAGAAACCATCATCTTCAACAACTCGTCACCACCATCTATCAAGAAAGAAAAAACTTGGTAGACCCGTAGGTTCTAAGAACAAGCCAAAACCACTACTTGTGATTGACAAAGCCAATAAGAATGTTGTAAAACCTGTTTTCATTGAAGTTCCTGAAACCTATGATGTGATTAGGACAATTGTTAAATTCGCTCGTCATCACCAAGTTAGCATCATAGTGCTGAACGCATCAGGAACTGTTTCCAATGTCACTATTCGTAACTCTCACTATTATGCTTCTCCTTTCACTCTTTATGGACCTTTCAAATTAATTTCCCTCACTGGTACCTACATACATAATACTTCTTTATCATCAACCCTTAACAACGACCCTCATTGTTCTTTTGCCATTTCTGTTTCTGGAATCAAAGAACAATGCTTTATTGGAAGAGTTGGAGGAAAAGTTGTTGCAGAAAATGGAGTTATGGTGGCAGCTGTTATTGTGAACAACTTTTAA 591 0.3807 MVESDIVFPSSSSLSSFDHSTDTDSVAGSPSLQKPSSSTTRHHHLSRKKKLGRPVGSKNKPKPLLVIDKANKNVVKPVFIEVPETYDVIRTIVKFARHHQVSIIVLNASGTVSNVTIRNSHYYASPFTLYGPFKLISLTGTYIHNTSLSSTLNNDPHCSFAISVSGIKEQCFIGRVGGKVVAENGVMVAAVIVNNF* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0014 196 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 195 - -
Vra7g0014 196 SUPERFAMILY AF0104/ALDC/Ptd012-like 74 192 - -
Vra7g0014 196 MobiDBLite consensus disorder prediction 40 56 - -
Vra7g0014 196 MobiDBLite consensus disorder prediction 1 62 - -
Vra7g0014 196 CDD DUF296 76 192 IPR005175 -
Vra7g0014 196 Pfam Plants and Prokaryotes Conserved (PCC) domain 76 191 IPR005175 -
Vra7g0014 196 ProSiteProfiles PPC domain profile profile. 72 196 IPR005175 -
Vra7g0014 196 Gene3D - 75 195 - -
Vra7g0014 196 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 14 195 IPR014476 GO:0003680
Vra7g0014 196 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0014 Vra-Chr7 336101 336691 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0014 38 195 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 33.898 4.29e-23 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0014 - - vun:114188375 333.954