Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0012 ATGGCCCACAGGCGTTGCCTCTTGATAAGAGGGAACCTTTTGAATCAAAAGTGCCACCCGTCTTTCAGTTATGTTCTCCACAGTGATGAAGGGAAACACGAAAGCACTGGCGAAAGGTCATCTTCAGCAGGGATTAGTAATTTTTTCCAAAGAAGGATGTTTGGGAACTCAGTGGATGGATCAATGTGGTGTTTTGCCTATTCTGAACATAGAATGTCTTCAAACAGATTCCTTTCTCCGAGCTCTGGGTGTAATTTATATCGACATATGTCAACAGCTAATCAGGGTTCCGATAAGATTGAAATGATGACTGACATAGCAGATGTTCTAAAAAACAATACGATGGAAGCTGTGAATTCTCAGGCTCCTATTCTTAAAGAAGTTGCAATTGCCTCTGCTGATTCTGTTTTACCTGTGAAGGCCTTGCAGTACATTATAGATGCCATGCATTCCTGCACTGGATTGAACTGGTGGGCAGCCATAGTTCTAACAACTCTCTTGATTCGAAGTGCAACGGTTCCACTCTTAATAAATCAACTTAAGGCCACTTCTAAGCTTACACTGATGAGGCCTCACATGGAAAAAATAAAGGAAGAGATGGAAGATAAGGCTATGGATCCCATTGCTGTTGCTGAATGTCAGAAAAAAATGAAGAGGCTATTTAAGGAACATGGTGCAAGTCCATTTACTCCATTGAAGGGGCTCCTTATTCAAGGTCCTGTCTTTATTAGTTTCTTCCTTGCGATAAGAAACATGGCTGAAAAGATGCCATCATTCAAGGATGGCGGAGCCTACTGGTTTGTTGATCTTACCACTCCAGATGCATTGTACATTTTGCCAGTTCTGACTGCATTGACATTCTTAATAACAGTAGAGTGCAATATGCAAGAAGGCATGGAAGGAAATCCAGCTGCTGGCACCATGAAAAAAGTCTCAAGGGTTCTTGCTGTCCTTACAGTTCCTTTCACCATGGGATTTCCGAAGGCTATATTTTGTTACTGGATTACATCAAATTTGTTTTCACTTGGATATGGACTCGTTCTTAAAGCTCCTGGTGTAAAAAAAGCTTTGGGCATCCCCATAATACCTGAAGCAGCAGCTACCAGTGGTGCACAATCTCCCTCTTCTATATTTCCTGCCCTGAAACAAGCTACAGCAGCAAGAATTGCACCAAAGTCATTGCCTGTTGAACCATCAAAACATACAAACACAAAGGCATCTTCTGATGTCAATCAGAGACTAAATCGTTTAGAGAAACAAGTGAAAAGAAGAAAGAAAAACAAGAAATGA 1290 0.4124 MAHRRCLLIRGNLLNQKCHPSFSYVLHSDEGKHESTGERSSSAGISNFFQRRMFGNSVDGSMWCFAYSEHRMSSNRFLSPSSGCNLYRHMSTANQGSDKIEMMTDIADVLKNNTMEAVNSQAPILKEVAIASADSVLPVKALQYIIDAMHSCTGLNWWAAIVLTTLLIRSATVPLLINQLKATSKLTLMRPHMEKIKEEMEDKAMDPIAVAECQKKMKRLFKEHGASPFTPLKGLLIQGPVFISFFLAIRNMAEKMPSFKDGGAYWFVDLTTPDALYILPVLTALTFLITVECNMQEGMEGNPAAGTMKKVSRVLAVLTVPFTMGFPKAIFCYWITSNLFSLGYGLVLKAPGVKKALGIPIIPEAAATSGAQSPSSIFPALKQATAARIAPKSLPVEPSKHTNTKASSDVNQRLNRLEKQVKRRKKNKK* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0012 429 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1L 76 392 - -
Vra7g0012 429 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 156 345 IPR028055 -
Vra7g0012 429 Pfam 60Kd inner membrane protein 157 347 IPR001708 GO:0016021|GO:0032977
Vra7g0012 429 PANTHER OXA1 76 392 IPR001708 GO:0016021|GO:0032977
Vra7g0012 429 Coils Coil 407 429 - -
Vra7g0012 429 MobiDBLite consensus disorder prediction 391 429 - -
Vra7g0012 429 MobiDBLite consensus disorder prediction 397 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0012 Vra-Chr7 260703 275547 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0012 137 428 Chloroplast and Mitochondria Gene Families AT2G28800 24.497 5.11e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0012 K03217 - gmx:100787806 687.952