Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0006 ATGCTTCAGATTCGGCTTAGCAGGGCTCCTGCATCAGAGGGGTCAGCAGGGGTGAAACAGTCACCTGTTGAGAATGTTACAGTTGCGTGCCCTGACCATCTGGTTCTTGCTGATCTTCCAGTTGCAAAGGGCATTGGTGCAGCCACGGCCACTTCTCTTGTGAAAACTTTGGGCCGTAGGTCCCGCCGCCAGCTTGGCGAACGAGTCCATTTCTGTGTTCGCTGTGATTTCCCTGTAGCCATTTATGGACGCCTGAGCCCTTGTGAGCATGCCTTTTGTCTGGATTGTTCTCGAAGTGATTCAATGTGCTACCTGTGCCCCAAATGGCCCAAATTTTCCAGGAAATTATCCCCAGTCCTGGAATTCAGGAATTGGTGGTGTGCCTTTTGAACAAACACAGGGTGGTATGGTTGTGGATCCAAGGGAGGGCAAAGGCATACTGGCACCACAGCCCATGCGCCTCCCACCACCACCTCCCCCACCACCACATGTGAAACAAAACTACTATTCTGGGGAGATTGGGCATGATGGTCAGGGTTATGGTTGGCAGCATGATAACCGTGATGGCTTTGGTAGTCAGGGCTAG 586 0.5239 MLQIRLSRAPASEGSAGVKQSPVENVTVACPDHLVLADLPVAKGIGAATATSLVKTLGRRSRRQLGERVHFCVRCDFPVAIYGRLSPCEHAFCLDCSRSDSMCYLCPKWPKFSRKLSPVLEFRNWWCAF*TNTGWYGCGSKGGQRHTGTTAHAPPTTTSPTTTCETKLLFWGDWA*WSGLWLAA**P*WLW*SGL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0006 189 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 111 IPR013083 -
Vra7g0006 189 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 106 IPR040383 GO:0016567|GO:0061630
Vra7g0006 189 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI 1 106 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0006 1 106 C2H2 Transcription Factor Family AT5G01160 74.528 1.52e-55 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0006 K15685 - gmx:100817582 206.838