Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g2070 ATGGGAACATATGGTTATATGCCTCCTGAATATGCTCTCCATGGACATTTCTCAATCAAATCTGATGTATTTAGCTTTGGTGTGATGGTAATGGAGATAATTAGTGGGAAAAAGAATCGCAATTTTCATGACTCTGAGCATCAGCTTAATCTTCTTAGTCATGCATGGAGATTGTGGATTGAAGACAAGCCACTGGAGCTAATAGATGAGGTATTAGATTATCCAACCGCACCAGTTGAAGTACTTAGATGCATTCATGTTGGTCTATTATGTGTACAACAAACACCACAAAACAGACCAAACATGTCCTCTGTGGTTTTGATGTTGAATGGTGAAAAGGTGTTGCCTGAGCCAAGTCCACCCGGGTTCTACACAGGCACAACTACTCAGTTTCCCATTCAGGCAGAATCTTCTTCCAGAAGTTGTGGAGATAGATCACAAAATGAAGTTACAGTGTCCTTGTTACAGCCACGATAG 477 0.4088 MGTYGYMPPEYALHGHFSIKSDVFSFGVMVMEIISGKKNRNFHDSEHQLNLLSHAWRLWIEDKPLELIDEVLDYPTAPVEVLRCIHVGLLCVQQTPQNRPNMSSVVLMLNGEKVLPEPSPPGFYTGTTTQFPIQAESSSRSCGDRSQNEVTVSLLQPR* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g2070 158 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 128 - -
Vra6g2070 158 MobiDBLite consensus disorder prediction 136 158 - -
Vra6g2070 158 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g2070 158 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 128 - -
Vra6g2070 158 SUPERFAMILY Protein kinase-like (PK-like) 1 130 IPR011009 -
Vra6g2070 158 Pfam Protein tyrosine and serine/threonine kinase 5 106 IPR001245 GO:0004672|GO:0006468
Vra6g2070 158 Gene3D Transferase(Phosphotransferase) domain 1 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g2070 Vra-Chr6 37317006 37318150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g2070 1 124 Receptor kinase-like Gene Family AT4G11480 53.968 3.36e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vra6g2070 PK_Tyr_Ser-Thr 8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g2070 - - var:108337036 317.39