Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g2047 ATGGAGGAGGAGAGATTTGATTCACCTTCACGTATTGTGACGTATTATAAGGGAGGTAATTCTTTTTCGAGGAGTTTAAAAGAGTTGGGTGAGATGATGGAGATATATGAGAATGCACTAGGGAATAGTCGTTATCTAGCTGGAGATGAATTCACACTTGCAGATCTCTTCCATCTTCCCAGTGTTCATAACTTGCTCAGTATCACTCAAATTGCTCCGCTATTTGCTTCTCCAAACCTTTCCAGATGGTCCAACGATATCTCCTCTCGTCCTTCTTGGAAGAAGCTTCTTCAAATTCGCAAAGAATACTTAAAGAGGAATTAA 324 0.4012 MEEERFDSPSRIVTYYKGGNSFSRSLKELGEMMEIYENALGNSRYLAGDEFTLADLFHLPSVHNLLSITQIAPLFASPNLSRWSNDISSRPSWKKLLQIRKEYLKRN* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g2047 107 Pfam Glutathione S-transferase, C-terminal domain 25 91 IPR004046 -
Vra6g2047 107 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 107 IPR010987 -
Vra6g2047 107 Gene3D - 1 101 - -
Vra6g2047 107 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 100 - -
Vra6g2047 107 SUPERFAMILY GST C-terminal domain-like 22 104 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g2047 Vra-Chr6 37034328 37034651 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g2047 31 99 Glutathione S-transferase Gene Family AT3G03190 48.571 1.36e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g2047 K00799 - vra:106763798 217.624