Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g2034 ATGGCCATTTTCAAGGCTCTTCTATTTTCAATTCTCATTTCTCAAATCATCGTGATTGTCGTGGAATCGGATACAAGGGTTGTTATCGAGAACCCATTAGAACGATCAAGTTCTAATCCTTCTCCTTCACCTCTAACCATAGATTGTGATGGTGAATGCAATAGAAGGTGTGAATTATCATCAAGACCAAATCTATGTAAGAGGGCATGTGGAACTTGTTGTGAAAGGTGCAATTGTGTGCCTTCGGGTACTAGTGGTCACTACGAAGAATGTCCATGCTATGCAAATATGACTACTCGTGGTGGAAGACACAAATGTCCTTAA 324 0.4043 MAIFKALLFSILISQIIVIVVESDTRVVIENPLERSSSNPSPSPLTIDCDGECNRRCELSSRPNLCKRACGTCCERCNCVPSGTSGHYEECPCYANMTTRGGRHKCP* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g2034 107 Pfam Gibberellin regulated protein 48 107 IPR003854 -
Vra6g2034 107 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 107 - -
Vra6g2034 107 PANTHER SNAKIN-2-LIKE 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g2034 Vra-Chr6 36922821 36923667 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g2034 - - gmx:100306171 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g2034 6 36922821 36923667 Vra6g2034 6 36922821 36923667 ECH
Vra6g2034 6 36922821 36923667 Vra5g1651 5 22925616 22926929 PCT