Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g2019 ATGGTTCATCTCACTAAGCTTCTTTCTTCTTCTTCCTCTCAGTTTCTTCCTTTCGCATTGTTGCTGTTATCTGTTTCCTTAAAAACAGAGGCTTTGTTGAAACTACCACCGAATGTGTCTGTTCCAGCAGTGTTTGTGTTTGGAGATTCCGTGGTGGACACAGGCAACAACAACAACAGAACGACGTCGTTTGCTAGGTCGAATTTCCCTCCGTATGGGAGAGACTTTGAAGGTGGCGTCGCTACTGGTAGATTCAGCAATGGAAAGGTTCCATCAGACCTTATAGTTGAAGAATTGGGAATCAAGGAGCTTCTGCCAGCATATTTAAAGCCAAATCTAGAGGCTAGTGATTTGGTGACAGGGGTCTGTTTTGCTTCAGGTGGCTCAGGATACGACCCTTTGACCTCCATAATAGAGGGATCAATGTCGTTAAGTGGGCAACTGGATCTGTTCAAAGAGTACATAGTAAAACTGAAAGGTTTGGTCGGAGATGAGAGAGCAAAGTTTATCTTAGCCAATAGTCTTTTCCTTGTGGAAGCAGGAAGCAGTGACATTTCCAACACCTATCGTACTCGTTCTCTCCTCTACGATCTTCCTTCTTACTCTGATCTTCTTCTGAATTCAGCTTCCACCTTTTTGACGGAATTAAATGAGTTAGGTGCAAGGAGGATTGCAGTGTTCAGTGCACCTCCAATTGGGTGTTTGCCATTTCAGAGAACAGTGGGTGGAGGCATACAGAAAAACTGTGCACCAAGGCCCAACAATTTGGCCCAATTATTCAACACCAAATTGTCCAATTTGCTGCGTTCTCTCAATCGTAACTTTCCCAGTAGCAGAAATGTTTTCGTCAATGTTTATGATCCTCTCCTCGACATCATCCTCAATTACAAAAAATATGGATATAAAGTGGGAGACACTGGATGCTGTGGAACAGGGAGAATAGAGGTTGCAATACTATGCAATAGTTTGGATTCTACGTGTCCGAATGTTGAAGATTATGTGTTTTGGGACAGTTTTCATCCCACAGAAAGCGCTTACAAAAGGCTCATAGCTCCTATTCTTCAAAAATATTTGTACCAATTCAAGTGA 1089 0.4261 MVHLTKLLSSSSSQFLPFALLLLSVSLKTEALLKLPPNVSVPAVFVFGDSVVDTGNNNNRTTSFARSNFPPYGRDFEGGVATGRFSNGKVPSDLIVEELGIKELLPAYLKPNLEASDLVTGVCFASGGSGYDPLTSIIEGSMSLSGQLDLFKEYIVKLKGLVGDERAKFILANSLFLVEAGSSDISNTYRTRSLLYDLPSYSDLLLNSASTFLTELNELGARRIAVFSAPPIGCLPFQRTVGGGIQKNCAPRPNNLAQLFNTKLSNLLRSLNRNFPSSRNVFVNVYDPLLDIILNYKKYGYKVGDTGCCGTGRIEVAILCNSLDSTCPNVEDYVFWDSFHPTESAYKRLIAPILQKYLYQFK* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g2019 362 Gene3D SGNH hydrolase 35 358 IPR036514 -
Vra6g2019 362 PANTHER GDSL ESTERASE/LIPASE EXL3 23 360 - -
Vra6g2019 362 Pfam GDSL-like Lipase/Acylhydrolase 44 349 IPR001087 GO:0016788
Vra6g2019 362 CDD SGNH_plant_lipase_like 42 357 IPR035669 -
Vra6g2019 362 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 44 55 IPR008265 GO:0006629|GO:0016298
Vra6g2019 362 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 23 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g2019 Vra-Chr6 36796921 36800868 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g2019 38 355 Pollen Coat Proteome AT1G75910 41.667 1.01e-73 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g2019 - - gmx:102668807 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1667 5 23041794 23047090 Vra6g2019 6 36796921 36800868 PCT