Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g2016 ATGGGTTTCATGCAGCTTATTACTACTTTTTCCCTTACCTCATTGCTCCGTTTCATAGTAATATTTGGTTTATGGTGCAGAGCAAAGGGTATGCTGAAGCTGCCATCAAACGTGTCAGTTCCAGCAGTGTTAGCATTTGGAGATTCGATCGTGGACTCCGGCAACAACAACAACATTAAAACATTGGTCAAGTGTAACTTCCCACCTTATGGGAAAGATTTTCAGGGAGGAAAACCATCTGGTCGATTCTGCAATGGAAAAATCCCTTCAGACATGATAGTTGAAGAACTGGGTCTTAAGGAGTATTTGCCTGCATATTTGGATCCAAATCTGAAATCCAGTGATCTTGTTACTGGCGTCTGCTTTGCCTCCGGTGCTTCAGGATATGATCCTTTGACACCCCAAATAGCGTCAGTTATATCATTATCTTCTCAACTAGACATGTTCAAGGAATATATAGGAAAGCTGAAAGGCATTGTCGGAGAGAGCAGAACAAACTTCATCCTAGCCAACAGTCTTTACCTTGTGGTGGCAGGCAGTGACGACATCGCCAACACCTATTTTGTTGCTCACGCCAGAATATTGCAGTATGACATTCCTTCTTACACTGACCTTATGGTCAACTCAGCCTCTAATTTTGTAAAGGATTTGTATAATCTGGGAGCTCGTAGAATTGCAGTGCTGAGTGCACCACCTATTGGGTGTGTGCCATCACAGAGAACTCTAGCTGGAGGATTAGAAAGAGGGTGCTCAGAAAAGTACAATAATGCAGCCAAGTTGTTCAATTCGAAACTCTCAAAGGAACTTGATTCCCTTCGCAGCTACCCCAATGGCAGAATTGTTTACATTGATGTTTACAACCCTTTATTCGATATCATTCAAAACTACAAAAAATATGGCTATGAAGTTATGGACAGAGGTTGCTGTGGCACAGGGAAACTAGAGGTTGCAGTTCTATGCAATCCTTTGGATTCCACTTGTTCTAATGCTTCTGAATATGTCTTTTGGGACAGTTACCATCCAACAGAAGGCGTTTACAGAAGACTAGTCAATCATGTTCTTGAAAAGTACACCACTCGGTTGTTTTGA 1089 0.4197 MGFMQLITTFSLTSLLRFIVIFGLWCRAKGMLKLPSNVSVPAVLAFGDSIVDSGNNNNIKTLVKCNFPPYGKDFQGGKPSGRFCNGKIPSDMIVEELGLKEYLPAYLDPNLKSSDLVTGVCFASGASGYDPLTPQIASVISLSSQLDMFKEYIGKLKGIVGESRTNFILANSLYLVVAGSDDIANTYFVAHARILQYDIPSYTDLMVNSASNFVKDLYNLGARRIAVLSAPPIGCVPSQRTLAGGLERGCSEKYNNAAKLFNSKLSKELDSLRSYPNGRIVYIDVYNPLFDIIQNYKKYGYEVMDRGCCGTGKLEVAVLCNPLDSTCSNASEYVFWDSYHPTEGVYRRLVNHVLEKYTTRLF* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g2016 362 CDD SGNH_plant_lipase_like 41 357 IPR035669 -
Vra6g2016 362 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 9 360 - -
Vra6g2016 362 PANTHER GDSL ESTERASE/LIPASE EXL3 9 360 - -
Vra6g2016 362 Pfam GDSL-like Lipase/Acylhydrolase 43 352 IPR001087 GO:0016788
Vra6g2016 362 Gene3D SGNH hydrolase 31 359 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g2016 Vra-Chr6 36771579 36773580 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g2016 37 355 Pollen Coat Proteome AT1G75910 39.319 3.35e-76 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g2016 - - gmx:100775689 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g2016 6 36771579 36773580 Vra6g2016 6 36771579 36773580 ECH
Vra6g2016 6 36771579 36773580 Vra5g1668 5 23054463 23058077 PCT