Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g2014 ATGGAACAGTTATTTTGGGAGAGAGCAGTATCAATTGTGTTCGTTTTCTTTGCTATCAGATTTCCCAGGGCAGTAGCTACTAAACCAGCAGTTCCAGCATTGTTTTCATTTGGAGACTCAATTCTTGATACGGGAAACAATAACAATCTTCAAACGATGAGCAAGTGTAATTTTCCACCCTATGGAAGGGATTTCCCTGGAGGAGTACCTACAGGAAGATTCTGCAATGGAAAAAATCCCACAGATTTGATAGCATCTGCATTGGGAGTAAAAGAAACAGTGCCAGCATATCTTAGCACCACCTTGACTCCTCAAGATCTCATCACTGGGGTTTCCTTTGCTTCTGGTGGTTCTGGGCTAGATGATCTCACTTCTCAAGTACAGGGAGTTATAACGACGCCAGCCCAACTGGCGATGTTCAAAGAATACATAGGAAAGCTGACAGCAGTGGTGGGACAACAACGTGCGAGTGAGATCCTAGCCAACAGCATCTTCCTTGTTTCTGCTGGCAACAACGACGTTGCCTTCACCTATTCTTTCCTTCTTGCCACAACACGTCCTTTCCCTGTATATGTCTCCTATTTAATTTCCCTCGCTAAAAACTTCTACAAGAATCTATATGATCTTGGAGTACGAAAAGTGTGGGTATTAAGCACATTGCCACTGGGATGCTTACCTGGAGGTAGAACAACAGGTGGGGGGCCATTGAGATTTTGTGCAGAACTTGCGAACATGGAAGCACAGACATTCAATGGGCAGTTATCAGCAGCAGTTGATTCTCTCAGAGCCAGTCTTCCAAATTATGACATTAGATTCGTGGATGTTTATACTCCTTTTCTTAGTATTATTAATAATCCACAGGCATCAGGGTTTACAGACGCCGGTGAAGCGTGTTGTGGGACTGCTGCATTTGGAGGAGTTTCAGGGCTGTGTAACCTTCTGGAAATATGTCCAAATCCTTCTACTTACATTTTCTGGGATTTTGCTCATCCAACCGAGAGAGCTTATCAGCTTGTGGTAAATTCTATTCTTCAGAAAATGAACATGAACACTTCTATCACAAATTAA 1068 0.4298 MEQLFWERAVSIVFVFFAIRFPRAVATKPAVPALFSFGDSILDTGNNNNLQTMSKCNFPPYGRDFPGGVPTGRFCNGKNPTDLIASALGVKETVPAYLSTTLTPQDLITGVSFASGGSGLDDLTSQVQGVITTPAQLAMFKEYIGKLTAVVGQQRASEILANSIFLVSAGNNDVAFTYSFLLATTRPFPVYVSYLISLAKNFYKNLYDLGVRKVWVLSTLPLGCLPGGRTTGGGPLRFCAELANMEAQTFNGQLSAAVDSLRASLPNYDIRFVDVYTPFLSIINNPQASGFTDAGEACCGTAAFGGVSGLCNLLEICPNPSTYIFWDFAHPTERAYQLVVNSILQKMNMNTSITN* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g2014 355 Pfam GDSL-like Lipase/Acylhydrolase 34 342 IPR001087 GO:0016788
Vra6g2014 355 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 351 - -
Vra6g2014 355 SUPERFAMILY SGNH hydrolase 37 347 - -
Vra6g2014 355 CDD SGNH_plant_lipase_like 32 346 IPR035669 -
Vra6g2014 355 Gene3D SGNH hydrolase 20 354 IPR036514 -
Vra6g2014 355 PANTHER GDSL ESTERASE/LIPASE EXL3 1 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g2014 Vra-Chr6 36759739 36761199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g2014 10 348 Pollen Coat Proteome AT1G75910 39.655 3.20e-78 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g2014 - - gmx:100789445 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g2014 6 36759739 36761199 Vra6g2014 6 36759739 36761199 ECH
Vra6g2014 6 36759739 36761199 Vra5g1669 5 23067270 23068893 PCT