Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1998 ATGGCGGCGCCGACAGTGAAGGTGTACGGTCCACCCATGTCTACTGCCGTGTCGAGAGTCTTGGCCTGTCTGTTGGAGAAAGACGTGAACTTCCAACTCCTTCCCGTTAACATGTCGAAAGGGGAACACAGAACCCCTGAATTCCTCAAGCTTCACCCTTTCGGACAAGTACCTGCATTTCAAGACGCCGACAACATTTCCCTTTTTGAGTCCAGAGCGATATGCCGCTACGTATGCGACAAATACGGGGACAAAGGGAACAAGGATCTCTACGGAAGCAACCCTCTGGCCAAGGCCTCCATAGATCAATGGCTGGAGGCAGAAGGTCAGAACTTCAACCCACCTTCCTCCACTCTGGTCTTCCAGCTTGCATTCGCGCCCCGAATGAAGATCAAGCAAGACGAGGGTGCCATCAAGCAGAGCAAAGAAAAGCTGGCGAAGGTGCTGGATGTGTACGAGAAGAGGCTCGGAGTGAGCCGGTTCTTGGCTGGGGATGAGTTCTCTCTCGCCGATCTTTCCCATCTTCCGAACGCCCACTATCTGCTCGCCGCCCCCGACGCTGCTCCTCTCTTCACTTCTCCCAACGTCGCCAGGTGGTGGGACGAGATCTCCTCTCGCGACTCCTGGAAGAAAGTCGTTGACTTGCAGCGAGGTGCCTGA 660 0.5515 MAAPTVKVYGPPMSTAVSRVLACLLEKDVNFQLLPVNMSKGEHRTPEFLKLHPFGQVPAFQDADNISLFESRAICRYVCDKYGDKGNKDLYGSNPLAKASIDQWLEAEGQNFNPPSSTLVFQLAFAPRMKIKQDEGAIKQSKEKLAKVLDVYEKRLGVSRFLAGDEFSLADLSHLPNAHYLLAAPDAAPLFTSPNVARWWDEISSRDSWKKVVDLQRGA* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1998 219 CDD GST_N_Phi 5 81 - -
Vra6g1998 219 SFLD Main (cytGST) 5 215 - -
Vra6g1998 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 86 IPR004045 -
Vra6g1998 219 SUPERFAMILY GST C-terminal domain-like 87 214 IPR036282 -
Vra6g1998 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 219 IPR010987 -
Vra6g1998 219 SUPERFAMILY Thioredoxin-like 4 86 IPR036249 -
Vra6g1998 219 CDD GST_C_Phi 96 213 IPR034347 -
Vra6g1998 219 Gene3D Glutaredoxin 4 92 - -
Vra6g1998 219 Pfam Glutathione S-transferase, N-terminal domain 5 78 IPR004045 -
Vra6g1998 219 Gene3D - 93 213 - -
Vra6g1998 219 PANTHER GLUTATHIONE S-TRANSFERASE RHO 6 214 - -
Vra6g1998 219 Pfam Glutathione S-transferase, C-terminal domain 118 207 IPR004046 -
Vra6g1998 219 SFLD Main.5: Phi-like 5 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1998 Vra-Chr6 36669033 36670174 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1998 8 217 Glutathione S-transferase Gene Family AT2G47730 49.289 2.54e-67 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1998 K00799 - zju:107422694 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1998 6 36669033 36670174 Vra6g1998 6 36669033 36670174 ECH