Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1994 ATGTCGCTCAACATGGCGGTTGTGCTCTGTTTTTCTCTCTTTGCAATGGCTGCTGTCGCCGAAGATCCCTACAGGTTCTTCAACTGGAATGTTACGTATGGAGACATTTATCCACTCGGCGTTCGTCAACAGGGAATACTTATCAACGGTCAATTCCCAGGTCCAGACATTCATTCTGTTACCAACGACAACCTCATCATCAATGTCTTCAACAGCTTGGACCAACCCTTTCTCCTGTCCTGGAACGGGGTGCAGCAGAGGAGGAACTCATTCGAAGACGGGGTTTCGGGAACAACGTGTCCCATTCCTCCAGGAGGGAACTTCACATACATACTTCAGGTGAAGGATCAGATTGGAAGCTTCTACTATTTCCCATCTCTTGCATTCCACAAAGCTGCCGGTGGATTTGGAGGTATTAGGATTTTGAGCAGACCCAGAATTCCAGTCCCTTTCGATGATCCCGCCGGTGATTACACTGTCCTCATTGGAGATTGGTACAAGTTCAACCATACGGATTTACGGGCTATTCTTGATAGAGGTAGCAGGCTTCCTTTCCCTGATGGAATCCTCATCAATGGTCGTGGCTCTAACGGAGAATCTTTCAATGTGGAACAAGGAAAGACGTACAGGCTGAGAATATCAAATGTGGGGTTGGAAAATTCCCTGAATTTCCGCATACAGAACCACAATTTAAAGCTGGTAGAAGTGGAAGGAACGCACACGGTTCAAACAACCTACTCATCTCTTGACGTGCACGTGGGCCAGTCTTACTCTGTTCTGTTCACTGCGGATCAACCTGCTAAGGACTATTACATCGTGGTCTCCTCTCGATTTACATCTACAGTCCTCACCTCCACTGCCATTCTTCGCTACAGCAACTCCGCAGGCCCAGTATCAGGCCCACCCCCTGGTGGACCTACCATTCAGATTGATTGGTCTCTCAACCAGGCCCGCTCCATCAGGACGAACCTGACAGCAAGTGGACCAAGGCCGAACCCGCAAGGGTCGTACCACTATGGTCTGATAAACACGACAAGGACCATCATACTGTCCAGTTCAGCTGGTATAGTGAACGGCAAACAGAGATACGGAATCAACAGCGTGTCTTACGTTGCTCCGGACACTCCTCTGAAGCTGGCAGACTACTTCAAAATCCCAGGTGTTTTCCGTGTCGGAAGCATTTCCGACAGGCCCACTGGAGGTGGCCTTTACCTTGACACATCTGTTTTGCAAACCGACTACAGAGCATTTGTGGAGATTGTCCTCCAAAACGAGGAAGACGTCATTCAGAGCTACCATCTTGATGGCTACTCTTTCTTTGTGGTTGGTATGGACGGAGGACAGTGGACGACTGCTAGCAGGAACGAGTACAATCTTCGAGATGCAGTTTCGCGGAGCACCACTCAGGTATATCCCAAGTCATGGACTGCTATCTATATTGCCCTTGACAATGTGGGAATGTGGAACTTGAGATCTGAATTTTGGGCACGGCAATACCTCGGCCAACAGTTTTACATGCGCGTTTATACAACATCAACCTCAATCAGAGATGAATATCCTATTCCAAAGAATGCACTGCTTTGTGGTAGAGCAAGTGGGAGACGCACTCGACCCCTTTGA 1620 0.4864 MSLNMAVVLCFSLFAMAAVAEDPYRFFNWNVTYGDIYPLGVRQQGILINGQFPGPDIHSVTNDNLIINVFNSLDQPFLLSWNGVQQRRNSFEDGVSGTTCPIPPGGNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFDDPAGDYTVLIGDWYKFNHTDLRAILDRGSRLPFPDGILINGRGSNGESFNVEQGKTYRLRISNVGLENSLNFRIQNHNLKLVEVEGTHTVQTTYSSLDVHVGQSYSVLFTADQPAKDYYIVVSSRFTSTVLTSTAILRYSNSAGPVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTRTIILSSSAGIVNGKQRYGINSVSYVAPDTPLKLADYFKIPGVFRVGSISDRPTGGGLYLDTSVLQTDYRAFVEIVLQNEEDVIQSYHLDGYSFFVVGMDGGQWTTASRNEYNLRDAVSRSTTQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQFYMRVYTTSTSIRDEYPIPKNALLCGRASGRRTRPL* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1994 539 PANTHER MULTI-COPPER OXIDASE 7 532 IPR045087 -
Vra6g1994 539 Gene3D - 24 145 IPR008972 -
Vra6g1994 539 Gene3D - 340 535 IPR008972 -
Vra6g1994 539 Pfam Multicopper oxidase 376 511 IPR011706 GO:0005507|GO:0016491
Vra6g1994 539 SUPERFAMILY Cupredoxins 151 331 IPR008972 -
Vra6g1994 539 CDD CuRO_2_AAO_like_1 156 291 IPR034271 -
Vra6g1994 539 Gene3D - 155 330 IPR008972 -
Vra6g1994 539 PANTHER MULTI-COPPER OXIDASE-LIKE PROTEIN 7 532 - -
Vra6g1994 539 SUPERFAMILY Cupredoxins 341 530 IPR008972 -
Vra6g1994 539 Pfam Multicopper oxidase 31 144 IPR011707 GO:0005507
Vra6g1994 539 CDD CuRO_3_AAO_like_1 373 493 IPR034275 GO:0005507
Vra6g1994 539 Pfam Multicopper oxidase 157 293 IPR001117 -
Vra6g1994 539 CDD CuRO_1_AAO_like_1 26 141 IPR034273 GO:0005507
Vra6g1994 539 SUPERFAMILY Cupredoxins 19 171 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1994 Vra-Chr6 36638163 36642266 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1994 - - gmx:100812416 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1994 6 36638163 36642266 Vra6g1994 6 36638163 36642266 ECH
Vra6g1994 6 36638163 36642266 Vra5g1697 5 23274519 23280714 PCT