Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1932 ATGCTTCATCTTCTACTTGTTTTCGTTCTTCTTCTTCTTATAGTCTTTGTAGTAAGAGTTGCATATTCTGTCATTTGGGTTCCATGGATCATTGCACGTCACTTTCGTCTGCAAGGCATCACGGGACCTCCCTACCGTCTGATCAAAGGCAACACAGATGAAATCCACCGCATGTACAGCGAGGTTCAATCCAAGCCAATGGCTTTGTGCCACGACATATTGGAGCGCGTGTGTCCATTTTATCACAGGTGGTCACGCGTGTATGGGAAAACTGTTTTGTACTGGCATGGGTCGAAGCCCAAACTGGTACTATCCGACCCGGATATGCTCAAGGAGATTCTTTTGAAAACGGGTGAATGGTTTGAGAGGATAGATCCGAACCCGTCGGTGAAACAGTTCTTCGGACAAGGGATTTTGGTGTTGAAAGGAGAGAAATGGGCTATGCATAGAGCAATCGCTAACCAGGCTTTTAAAATAGAACGTGTTAAGTTATGGGTTCCTCAAATATCTGATTGTACAAAAGGAATGTTTTACAAGTGGAAAAATGAGAACAAAAACACTGATGAATTTGAGATTGAAGTTTGTAAAGATCTACATGATCTTACATCTGATATTATATCCAAAGTTGCTTTTGGAAGTAACTACGAAGAAGGGAAAGAGATTTTTGAGTTACTAGAAGAACATTATCATTTGGTCTCTCTAGCTGTCAGAAGTGTTTATATTCCTGGATTTAGGTTTCTACCAACCAAGAAGAACAGAGAAAGAAAGAGGTTAGAGAAGAAAACATATGAAGCAATTAAGGTACTGATTGAGGAGAGTAAAGAAGCAGAACATGATTCAGAAAACTTGCTTTCTTTGTTGATGTCTTCTCACAAATTCATCAACAATGAGACACATAAATTAAGGTTGGGTGAAATAGTGGATGATTGCAAGAATTTTTACATGGCTGGAAAGGAAACAAGTGCTAATTCATTAAGTTGGGCACTCTTCCTTTTAGGGTTAAATCAAGAATGGCAAAGGAGGGCACGTGAAGAGGTGTTGAGTGTTCTTGGACCTAATTCTTTACCAACTTCAGAAACATTAAGTGAACTCAAACTTGTTAACTTGATACTTCAAGAAACACTAAGACTATACCCTAATCCAGGGGCATTGGTGAGGGAAGCAAGCAAAAGAGTTAAGTTGGGTAAGATTGATATTCCAGCTGGTACACAACTCTATTTGTCTATCACTTCAGCTCATCATGATACTGAGTTTTGGGGAGAAGATGCTCTTGAATTCAATCCTATGAGATTTGCAGAGCCTAGGAAGCATTTAGCTCCATATTTTCCCTTCGGATTAGGTCCTAACTATTGTGTAGGGCAAAATCTGGCTGTGTTTGAAATGAAAATTGTACTTGCCATGGTGTTGCAAAGGTTTTCTTTTGTTGTCTCACCTTCCTATGCTCATGCTCCAATGTTGTTGATGACTATTACACCTCAATATGGCATGCAAATTATCTTTAGGAAACTATGA 1512 0.3942 MLHLLLVFVLLLLIVFVVRVAYSVIWVPWIIARHFRLQGITGPPYRLIKGNTDEIHRMYSEVQSKPMALCHDILERVCPFYHRWSRVYGKTVLYWHGSKPKLVLSDPDMLKEILLKTGEWFERIDPNPSVKQFFGQGILVLKGEKWAMHRAIANQAFKIERVKLWVPQISDCTKGMFYKWKNENKNTDEFEIEVCKDLHDLTSDIISKVAFGSNYEEGKEIFELLEEHYHLVSLAVRSVYIPGFRFLPTKKNRERKRLEKKTYEAIKVLIEESKEAEHDSENLLSLLMSSHKFINNETHKLRLGEIVDDCKNFYMAGKETSANSLSWALFLLGLNQEWQRRAREEVLSVLGPNSLPTSETLSELKLVNLILQETLRLYPNPGALVREASKRVKLGKIDIPAGTQLYLSITSAHHDTEFWGEDALEFNPMRFAEPRKHLAPYFPFGLGPNYCVGQNLAVFEMKIVLAMVLQRFSFVVSPSYAHAPMLLMTITPQYGMQIIFRKL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1932 503 Pfam Cytochrome P450 81 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1932 503 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1932 503 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1932 503 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1932 503 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1932 503 PANTHER CYTOCHROME P450 FAMILY 709 PROTEIN 3 498 - -
Vra6g1932 503 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1932 503 PRINTS E-class P450 group I signature 109 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1932 503 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1932 503 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1932 503 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1932 503 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1932 503 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1932 503 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1932 503 Gene3D Cytochrome P450 29 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1932 503 SUPERFAMILY Cytochrome P450 38 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1932 503 PANTHER CYTOCHROME P450 FAMILY MEMBER 3 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1932 Vra-Chr6 35930649 35933433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1932 22 503 Cytochrome P450 AT1G75130 50.722 4.46e-176 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1932 - - gmx:100789281 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1932 6 35930649 35933433 Vra6g1932 6 35930649 35933433 ECH