Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1925 ATGACATCCGACGGAGCTACTTCGGCTGCTGCGGCGGCGGCGAGTAGGAGAAAGCCGTCGTGGAGGGAGAGAGAGAATAACCGTAGGAGAGAACGAAGGCGAAGAGCGATCGCGGCGAAAATATACTCTGGACTTCGAGCTCAGGGGAACTATAACTTGCCAAAGCACTGTGATAACAACGAAGTTCTCAAAGCGCTTTGTGCAGAAGCTGGTTGGTGCGTCGAAGAAGACGGAACCACATATCGCAAGGGTTCCAAACCACCTCTGGCCAATGGTGCAGGGAGCTCCATGAGAAACATTCTCTTTTCTTCTTCACAAAATCCAAGTCCGTTTTCTTCGTCGCATCCCAGCCCAATTCCTTCATACCAAGCGAGTCCTTCTTCCTCCTCTTTCCCAAGCCCGTTTCGGTTAGATGTGGACAAGGACAATGTATCAAACCTCATTCCATACATTCGCAATGCCTCTCTGTCTCTTCCTCCTCTGAGGATATCAAACAGTGCCCCTGTGACGCCGCCTCTGTCATCACCTACGTCAAGAAATCCAAAACCAATTCCCACATGGGAGTCCATTGCCAAAGAATCTATGACCTCCTTCAACTACCCTCTCTTTGCAGCTTCTGCTCCTGCTAGCCCCACGCACCGTCACCTTTACACCCCGGCCACTATTCCAGAGTGTGACGAGTCTGATACTTCCACCTGTGAATCCAGCCAGTGGGTGAAATTTCAAGCATTTGCTCCTTCTGCATCTGTGTTGCCAACTTCTCCAACCTTCAATCTTGTTAAACCTGTGGTTCCTCCCGGTGTGCCTGATAACTCAATCCAAGAGATGAGGACGAGTTCAGAAGAGATTGGAGTACAGGTAATGCCTTGGGTTGGTGAAAGAATTCATGAAGTGGCATTAGATGATTTGGAACTCACTCTTGGAAGCGGGAAGGTGCGGAGTTAG 945 0.4995 MTSDGATSAAAAAASRRKPSWRERENNRRRERRRRAIAAKIYSGLRAQGNYNLPKHCDNNEVLKALCAEAGWCVEEDGTTYRKGSKPPLANGAGSSMRNILFSSSQNPSPFSSSHPSPIPSYQASPSSSSFPSPFRLDVDKDNVSNLIPYIRNASLSLPPLRISNSAPVTPPLSSPTSRNPKPIPTWESIAKESMTSFNYPLFAASAPASPTHRHLYTPATIPECDESDTSTCESSQWVKFQAFAPSASVLPTSPTFNLVKPVVPPGVPDNSIQEMRTSSEEIGVQVMPWVGERIHEVALDDLELTLGSGKVRS* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1925 314 MobiDBLite consensus disorder prediction 96 134 - -
Vra6g1925 314 MobiDBLite consensus disorder prediction 1 35 - -
Vra6g1925 314 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 313 - -
Vra6g1925 314 MobiDBLite consensus disorder prediction 165 184 - -
Vra6g1925 314 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 313 IPR033264 GO:0003700|GO:0006351|GO:0009742
Vra6g1925 314 Pfam BES1/BZR1 plant transcription factor, N-terminal 15 154 IPR008540 -
Vra6g1925 314 MobiDBLite consensus disorder prediction 78 134 - -
Vra6g1925 314 MobiDBLite consensus disorder prediction 17 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1925 Vra-Chr6 35873478 35876428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1925 1 314 BZR Transcription Factor Family AT1G19350 66.766 4.70e-119 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vra6g1925 BES1_N 1.5e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1925 K14503 - gmx:100807071 501.901