Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1917 ATGAATCATGTTGCATTTCTCTTCACAACAATGTTGTTTCTTCTTTGTTTTGATGGCAAGGCACAGCAAAATTACTCTGGGAATTCANTTCTCAGCTGCAAGAATGATGACAAAATGGGGCCTTCACCTTCATTCCTCTATACCTGCAATGGCCTCAACAAATCATGCATGGCCTTCTTAATCTTCAAATCAAGNCCTCCTTTTAACACCATACTCACAGTTTCCAACCTCACNTCATCAAACCCAGAAGAGCTTGCAAGAATCAATGATGTAACTGTGCTCACAGAGTTCCCAACTGGGAAAGAAGTGATTGTCCCTCTNAACTGTTCTTGTTTAAGTAGGGACTATTACCAAGCTGAAACTGAATATGTATCGGGGCAATCATCAACAGATTTCTCAGTGGCAAATGATACTTTTCAGGGTTTGACCACTTGTGATTCGCTCATGCGTGCTAATCCATATGGGGAATTTGATTTGCATCCTGGCATGGAGTTGCACGTGCCACTCAGATGTGCTTGTCCAACAATGCATCAGGTCACAAACGGCACCAAGTATTTGCTGACATACTCAGTGAACTGGCATGATAACATTACAAGTATTGCTACAAGATTCAATGTAGCAGCAGGTAATTTGGTTGATGCTAATGGTTTTAACACACCAACAGAAACTCTTTTTCCCTTCACAACTGTTCTTATTCCTTTGCCAAATGAACCTCTGAGTTCGATGACCAAAGTTGTTAGTGATCCACCAGATATGTCACCTTCTCTTATTTGCAGCTCCATGAAGTGCAAGTCAAAGGGGAAATTCTACACTGCTATTGCCACCACAGGGGGTTCCATTGTGGTTCTGTGTGTTGTCCTTTATGGGGGTTTTCTGTTCAGAAAGAGATCTGCAAGGTTCGTTAAGAGAGGTGAAGAAGGTGAGAAAGCAAAGAGCTTATCTTCAGATGATATCCGTGGTGAGATAGCAATCATTGAGCATCACTCTAAAGTTTATGAGTTTGAGGAAGTACAGGAGGCCACAGAAAATTTTAGTTCAAAGAATAGAATTAAAGGTTCAGTGTTTCGTGGGGTATTTGGTGAAGAGAAGAACATATTGGCTGTTAAAAAAATGAGAGGAGATGCAGCCAAGGAAGTGAATTTGCTGAAAAGAATCAATCATTTCAACCTGATAAAGCTGNAGGGTTACTGTGAAAACGATGCTTGTTCTTATCTTGTTTATGAGTATATGGAAAATGGCTCTTTGAGAGAATGGCTAAGCAAAAACAGGACTACAGAGCACCAGATTTTGGCAAAGAGGATTTTGATTGCTCTGGATATTGCAAATGGTCTTCAGTATCTTCACAACTTCACGGAACCTTCCTATGTGCACAGGAACATAAATTGTGGAAACATTCTTCTAAACAAAGATCTAAGAGCCAAGATAGCAAATTTCGCACAAGCAGAAGAATCAGAAAGGAAAATAACTTCCGGTTGTNCCTTGTCAGATATGGAGAGGGGTTATATTTCTCCAGAGTATCTGGAGGCAGGGATAGTGACCACCAAAATGGACGTTTATGCTTTNGGAGTGGTACTGTTGGAATTGATCACAAGTGAAGATTTTGTTACTATACCAGAAGAGAGAGAAGCAATGCTTCATGTAGTCATAGTAAACTTCATTGGAAAAGAGAATGAAGAAGAGAAGGTGAGTNTGTTCGTTGATCCTAGCTTCACTGGAAACAATGAGAAAGTGTGTGCTCTCCAGCTAATTAAATTAGGTCTAACCTGCTTGATTCAACAACCAGAAGAGAGGCCAACCATGGTACAGGTAGTCTCTAGGTTATTGAAAATATATGTAAGTTATATGGACAAAATACAAAATATTTCCTCTTAG 1872 0.3985 MNHVAFLFTTMLFLLCFDGKAQQNYSGNSXLSCKNDDKMGPSPSFLYTCNGLNKSCMAFLIFKSXPPFNTILTVSNLTSSNPEELARINDVTVLTEFPTGKEVIVPLNCSCLSRDYYQAETEYVSGQSSTDFSVANDTFQGLTTCDSLMRANPYGEFDLHPGMELHVPLRCACPTMHQVTNGTKYLLTYSVNWHDNITSIATRFNVAAGNLVDANGFNTPTETLFPFTTVLIPLPNEPLSSMTKVVSDPPDMSPSLICSSMKCKSKGKFYTAIATTGGSIVVLCVVLYGGFLFRKRSARFVKRGEEGEKAKSLSSDDIRGEIAIIEHHSKVYEFEEVQEATENFSSKNRIKGSVFRGVFGEEKNILAVKKMRGDAAKEVNLLKRINHFNLIKLXGYCENDACSYLVYEYMENGSLREWLSKNRTTEHQILAKRILIALDIANGLQYLHNFTEPSYVHRNINCGNILLNKDLRAKIANFAQAEESERKITSGCXLSDMERGYISPEYLEAGIVTTKMDVYAXGVVLLELITSEDFVTIPEEREAMLHVVIVNFIGKENEEEKVSXFVDPSFTGNNEKVCALQLIKLGLTCLIQQPEERPTMVQVVSRLLKIYVSYMDKIQNISS* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1917 623 ProSiteProfiles Protein kinase domain profile. 295 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g1917 623 Pfam Protein tyrosine and serine/threonine kinase 370 607 IPR001245 GO:0004672|GO:0006468
Vra6g1917 623 ProSiteProfiles LysM domain profile. 187 232 IPR018392 -
Vra6g1917 623 Gene3D Phosphorylase Kinase; domain 1 305 409 - -
Vra6g1917 623 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 4 616 - -
Vra6g1917 623 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 4 616 - -
Vra6g1917 623 Gene3D Transferase(Phosphotransferase) domain 1 410 621 - -
Vra6g1917 623 Pfam LysM domain 195 233 IPR018392 -
Vra6g1917 623 Gene3D LysM domain 175 244 IPR036779 -
Vra6g1917 623 SUPERFAMILY Protein kinase-like (PK-like) 327 607 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1917 Vra-Chr6 35776377 35791849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1917 4 610 Receptor kinase-like Gene Family AT2G23770 36.220 1.34e-116 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vra6g1917 PK_Tyr_Ser-Thr 2.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1917 - - gmx:100806221 993.416