Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1744 ATGTCATTGAGAAGATCACCGTCTCCGTCCCCGTGCTGCGGCGACAGTCACTTCGTGCTGCTGGTGCCTGTCCTTCTCGTTATTCTCCACTCGCTCCTTCTGCTTCCTCATTCCTCGCTTGCTATTCGACCTATCGAGTCGGATCAGATCGAACTCGCCAACGCGACCGAGTCCAACGTCTCTCTCTCGCGACCTCGCGAAGGAAGCTTTGCCGACATAATTGATCGCGCGCTGGAGCACGAGTTCACCGAGAACGACCAGAACGAAGCGGCTGATCCGGGAAGTTTCAACAACAGTGTAGCAGAACAACAGGCTGTTCTGGAAACTGTGGCGCGAGTCACACCAAACAAGAATGACACAAAGGATGAAAAGTCATTTCAACTACATCATGTATTCAATAGAGGTGAGGATACCCCAATGTTGATAGATCGGAAGGACAATGTCTTTATCATTTCTAACTTTAAATCCAAGTATCCGGTGCTCCAGCTAGATTTACGATTGATTTCAGACCTGGTAGTTGCTATTGTTTCAGCAACTTGTGGAGGCGTTGCATTTGCTTTTGCTGGACAACCGGTGATAACCGGATATCTTCTAGCTGGCTCCATAGTTGGTCCTGGCGGCTTTAACTTCGTCAGTGAAATGGTGCAGGTGGAAACAGTGGCACAATTTGGTGTAATATTTCTTCTTTTTGCATTGGGCCTCGAGTTCTCCACAACAAAGCTCCGAGTTGTAAGAGCTGTTGCTGTTCTTGGAGGTCTACTTCAGATTTTTCTATTTATGTGCATGTGTGGACTTACTGTATCGCTATGTGGTGGTAAAGCTTCAGAAGGGGTTTTTGTTGGTGCTTTCCTTTCCATGTCTTCAACAGCAGTGGTCTTGAAGTTTTTGATGGAAAAGAACACCACTAATGCTCTTCATGGACAAGTCACAATTGGGACCCTTATTTTACAGGATTGTGCTGTTGGATTGCTCTTTGCTTTGCTTCCAGTTCTGGGTGGCACCTCAGGTGTTTTTCAAGGAGTGTTATCAATGACCAAGCTGTTGGTGACTTTAATTGCTTTCCTCTCTGTTCTGACTATATTGTCTCGCACATGCCTTCCATGGTTACTTAAACTGATGATAAGTCTCTCATCACAGACAAATGAGCTCTATCAATTGGCGTCTGTTGCATTCTGCTTGCTAGTAGCCTGGTGTAGCGATAAGCTGGGACTAAGTCTAGAATTAGGTTCCTTTGCCGCTGGAGTGATGATTGCAACCACTGATCTGGCTCAACATACACTAGAGCAAATTGAACCTATTCGCAATCTTTTTGCTGCTCTTTTCCTTGCCAGCATTGGAATGCTGATTCATGTTCATTTTCTCTGGAACCATGTTGATATTTTGGTAGCATCTGTAATATTGGTGATTGTTATAAAAACAATCATAATTGCATCTGTTGTGAAAGGATTTGGTTACAACAACAAGACCTCAATGCTTGTTGGAATGTCGATGGCACAGATAGGAGAATTTGCTTTTGTTCTTCTAAGTCGTGCTTCAAACCTCCATCTAGTTGAGGGTAAATTATATCTGCTGCTTCTTGGGACTACAGCTCTTAGTCTGGTAACAACTCCACTACTTTTCAAGCTTATTCCTGCCGTAGTGCATCTTGGTGTGCTATTGAAGTGGTTCTCTCCTGACAGTTCAGTGGAGATAGGATATAATAAGGTAGATAGTCTCCGCTCAGACAGTGACAACTCATCTGAACCCCAAAAATGGAAAGGACAGGGGAGAGGAACGATAANATATTGA 1788 0.4435 MSLRRSPSPSPCCGDSHFVLLVPVLLVILHSLLLLPHSSLAIRPIESDQIELANATESNVSLSRPREGSFADIIDRALEHEFTENDQNEAADPGSFNNSVAEQQAVLETVARVTPNKNDTKDEKSFQLHHVFNRGEDTPMLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVVAIVSATCGGVAFAFAGQPVITGYLLAGSIVGPGGFNFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFMCMCGLTVSLCGGKASEGVFVGAFLSMSSTAVVLKFLMEKNTTNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVFQGVLSMTKLLVTLIAFLSVLTILSRTCLPWLLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMIATTDLAQHTLEQIEPIRNLFAALFLASIGMLIHVHFLWNHVDILVASVILVIVIKTIIIASVVKGFGYNNKTSMLVGMSMAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGVLLKWFSPDSSVEIGYNKVDSLRSDSDNSSEPQKWKGQGRGTIXY* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1744 595 Gene3D - 165 548 IPR038770 -
Vra6g1744 595 PANTHER K(+) EFFLUX ANTIPORTER 6 19 577 - -
Vra6g1744 595 MobiDBLite consensus disorder prediction 575 595 - -
Vra6g1744 595 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 19 577 IPR045158 GO:0015386|GO:0071805|GO:1902600
Vra6g1744 595 Pfam Sodium/hydrogen exchanger family 172 541 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1744 Vra-Chr6 33674403 33687890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1744 64 576 Antiporters AT5G11800 82.852 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1744 - - gmx:100811030 970.689