Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1730 ATGTTTCTGATTCAGGATCTCTTCTCCCTCCCGCGCCTCCACCACGTCATCTCAGCAGAATCGGTTTTGCAGTCTCTAGGCGAGTCGGTTACGAGTTCGAGTTGCAAAAGCACGGAGTTGGAGCAATGTCGCGACGAGTCAGCGGCGTTGGTGTTGAAATTCGTGGCGATGGCGTCGATTTTGTTGGCCGGATTTGGAGGGGTCGCGATTCCGCTAGCGGGGAAGTCGCGGCGGTTTCTTCGGCCGGATGGGGATGCCTTCACGGCGGCGAGGGCGTTCGCGGCGGGGGTGATTCTCGCCACGGGGTTTGTGCACATGCTGAGGGATTCGTGGGAGGCGCTAGGAGACCCGTGTCTGAGAACCTACTGGAGCGCGTGGGCGAAGTTTCCTTTCACCGGTTTCTTCGCCATGGTTTCCGCGCTCTGCACTCTCCTCATTGACTTTATGGCGACTGCGTACTACGAGCGGAAGGAGGGGCGTGGACGTGTGGAGCGTGCGAAGGTTGTTGAGTGTGGGAGTGACGAGGAGGCGTTGTTGGAAACGGGTATAGTGGAGGTTAAGGATGTTGGGGGAGAGGGAAGTCACGCGGTGCAGCGAACACACTCCCACTCGCATCACCGTGATGATGTGGAAAGTACGGTTCGGCACGTCGTGGTCTCACAGGTATTGGAGCTTGGGATTGTATCTCATTCGATGATAATTGGGCTATCTCTAGGAGTTTCGCAAAGCCCTTGTACCATGAGACCCCTAATTGTAGCATTATCGTTCCATCAGTTCTTCGAAGGATTTGCACTTGGTGGATGCATCGCCCAAGCCCAATTCAAGACCTTGTCAGCAACAATTATGTCATGTTTTTTTGCACTAACAACGCCCCTAGGTGTTGCCATTGGGGCTGGTATTGCTTCAGTTTTTAACCCTTACAGTCCAGGAGCACTCATCACTGAAGGCATCTTGGACTCTTTCTCAGCTGGGATTTTAATGTACATGGCTTTGGTGGACTTAATAGCCGCAGAATTTCTTAGCAAGAAAATGCATTGCAACTTCAGGCTTCAGATTACATGTTACTGCTTGCTTTTCCTTGGAGCTAGCTTGATGTCTTCACTCGCAATTTGGGCATGA 1119 0.5264 MFLIQDLFSLPRLHHVISAESVLQSLGESVTSSSCKSTELEQCRDESAALVLKFVAMASILLAGFGGVAIPLAGKSRRFLRPDGDAFTAARAFAAGVILATGFVHMLRDSWEALGDPCLRTYWSAWAKFPFTGFFAMVSALCTLLIDFMATAYYERKEGRGRVERAKVVECGSDEEALLETGIVEVKDVGGEGSHAVQRTHSHSHHRDDVESTVRHVVVSQVLELGIVSHSMIIGLSLGVSQSPCTMRPLIVALSFHQFFEGFALGGCIAQAQFKTLSATIMSCFFALTTPLGVAIGAGIASVFNPYSPGALITEGILDSFSAGILMYMALVDLIAAEFLSKKMHCNFRLQITCYCLLFLGASLMSSLAIWA* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1730 372 PANTHER ZINC/IRON TRANSPORTER 31 372 - -
Vra6g1730 372 TIGRFAM zip: ZIP zinc/iron transport family 35 372 IPR004698 GO:0005385|GO:0016021|GO:0071577
Vra6g1730 372 Pfam ZIP Zinc transporter 52 369 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vra6g1730 372 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 31 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1730 Vra-Chr6 33528032 33532639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1730 26 372 Inorganic Solute Cotransporters AT1G10970 61.111 5.76e-149 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1730 K14709 - gmx:100809426 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1730 6 33528032 33532639 Vra5g1393 5 20678875 20680782 PCT