Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1716 ATGGTGTTCATGCAATTGGAATGGCCATGTGTAGCCATAATCACCCTCATGCCTTTGCTTGGAGCCTTATTGGGTTATCTTTATGGGCCCTATTGGGGGCTCAGGAAAGTTCCAGGCCCACCTTCTCTCCCTCTTCTAGGACACCTTCACTTGCTCGCCAAATATGGCCCTGATGTCTTCTCACACCTTGCCAATCAATATGGCCCAATTTACAGATTTCACATGGGAAGACAACCACTAATCTTGGTAGCAGATCCAGAGCTTTGTAAAGAGGTGGGAATTAAGAAATTCAAAGACATTCCAAACAGAAGCGTTCCCTCTCCTATTTCTGCCTCACCTCTTCATCAAAAAGGGCTCTTCTTCACCAGGGACTCACGATGGTCAACCATGAGAAACACCATATTGTCAGTGTATCAACCCTCACACTTGGCTAGTTTAGTGCCAATGATGCAATCATTCATAGAATCTGCAACAGAAAATCTTGACACCCCAAATGAGGACATGATCTTTTCTGATCTTTCCCTAAGACTAGCGACTGATGTGATTGGAGAGGCAGCATTTGGTGTCAACTTTGGCCTCTCTAAGCCCCATTCAGTTTGTGAATCAATCAAGAGTGTTAACAGTGTGAAAAATGGTGATGATGATGATGAAGTATCAGATTTCATCAATCAACACATCTACTCCACAACACAACTTAAGATGGACTTGTCTGGTTCCTTCTCCATTATACTTGGTCTACTTGCTCCAATACTTCAAGAGCCATTTAGGCAGATTCTAAAGAGAATACCAGGCACAATGGACAGGAAAATAGAGAGTATTAATGAGAAACTGAGTGGTCGTCTTGATGAGATTGTCAAGAGGAGAATGAAGGACAAGAACCGAACTTCAAAAAACTTCCTATCACTAATTTTGAATGCAAGAGAATCAAAGCTTGTATCAGAAAATGTGTTTTCACCTGAATACATTAGTGCTGTTACTTATGAGCACTTACTTGCTGGGTCAGCTACCACAGCCTTTACTTTGTCATCCATTGTCTACTTGGTTGCTGGTCACCTAGAAGTTGAGAAAAAGTTACTTCAAGAGATTGATGAATTTGGTCCATCTGACAAGATTCCCACTGCCCAAGATCTGCATGATAGTTTTCCTTATCTTGATCAGGTGATTAAAGAGGCCATGAGGTTTTACACTGTCTCCCCATTGGTTGCAAGAGAAACATCAAATGAGGTAGAGATAGGAGGTTACCTTCTTCCAAAGGGGACGTGGGTATGGTTAGCTATTGGAGTTCTAGCAAAAGATCCAAGAAATTTTCCTGATCCAGAGAAGTTTAAACCAGAGAGGTTTGACCCCAAATGTGAAGAAATGAAACTAAGGCATCCTTATGCATTCATACCATTTGGAATTGGTCCTCGGGCATGTATTGGTCAGAAATTTTCCCTACAAGAGCTCAAGCTTACTCTGATTCATTTGTACCGAAAATATGTGTTTCGGCATTCCCTAAACATGGAAAAGCCTGTAGAAATGGAATATGGAATGGTTCTCAACTTCAAGCATGGTGTCAAGCTTAGAGTCATAAGAAGAACACAATAA 1587 0.4146 MVFMQLEWPCVAIITLMPLLGALLGYLYGPYWGLRKVPGPPSLPLLGHLHLLAKYGPDVFSHLANQYGPIYRFHMGRQPLILVADPELCKEVGIKKFKDIPNRSVPSPISASPLHQKGLFFTRDSRWSTMRNTILSVYQPSHLASLVPMMQSFIESATENLDTPNEDMIFSDLSLRLATDVIGEAAFGVNFGLSKPHSVCESIKSVNSVKNGDDDDEVSDFINQHIYSTTQLKMDLSGSFSIILGLLAPILQEPFRQILKRIPGTMDRKIESINEKLSGRLDEIVKRRMKDKNRTSKNFLSLILNARESKLVSENVFSPEYISAVTYEHLLAGSATTAFTLSSIVYLVAGHLEVEKKLLQEIDEFGPSDKIPTAQDLHDSFPYLDQVIKEAMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLAIGVLAKDPRNFPDPEKFKPERFDPKCEEMKLRHPYAFIPFGIGPRACIGQKFSLQELKLTLIHLYRKYVFRHSLNMEKPVEMEYGMVLNFKHGVKLRVIRRTQ* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1716 528 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1716 528 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1716 528 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1716 528 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1716 528 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1716 528 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1716 528 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1716 528 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1716 528 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1716 528 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1716 528 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1716 528 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1716 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Vra6g1716 528 SUPERFAMILY Cytochrome P450 31 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1716 528 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 527 - -
Vra6g1716 528 Gene3D Cytochrome P450 28 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1716 528 Pfam Cytochrome P450 38 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1716 528 PANTHER THROMBOXANE-A SYNTHASE 9 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1716 Vra-Chr6 33357973 33360886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1716 75 526 Cytochrome P450 AT2G26170 72.124 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1716 K20771 - gmx:100805689 926.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1716 6 33357973 33360886 Vra5g1387 5 20617048 20622546 PCT