Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1685 ATGATATTATTTTGGGTGGCATCGTATAGGCCGAGAAAGGAGCCATCGGAGGTCGGTATCTGTGGCAAGTCCATCAGAAGAGTCTTTTAGGCGTAGAGGTTGGCCATAAATGGCTCTTCCATTTCCATTCTCGATGATTGGGTTGAGCACAACAGATCCGTCCTCAACCTTGGCTACGCCAGCGTATCCAACGATGCTTGCATTTTTAGTGTCGTTAAAGTTAGCTATGGTGAAGGAAAGTGGTTGAGCCAAGTTTATTGGAAGGATACAGAGGATGAGGAACAGAAGAAAAGCTTTGGAGTAATACTAGAATTGTCTAGGGATACAAGGAATATAGGAGAGAAAAAAAAACAGCAGCTGAGAATGAGAATGAGGTTGCTAGAAATGATGACAATGTTTGTTCTTGTGCTGGCTCTTCATCCTCCTTTTCTTAAAACTGTAGAATCACTAAATTTCAACATAACAAACTTCGAAGACCCTGAGAGTGCAAAAAACATGGCATACGTCGGTGATGGCAGAGCCAGCAACGGCAGCGTAGAACTCAACATTGTGGATTATCTTTTCCGCGTTGGAAGAGCCTTGTACGCAAAACCTCTGCGCCTGTGGGACCAATCATCGAATGTTCTCACAGACTTCACCACACACTTCACTTTCTCCATTGACAGAGCCAAAAACGGCACCTATGCTGACGGTTTCGCCTTCTACATGGCCCCTCATGGCTACCCGATTCCTCCCAACTCAGGTGGTGGCACTTTTGCCCTTTTCAACACCACCTCCAATAACTTTATTCCCCAAAACCACGTCCTCGCTGTTGAGTTTGACACCTTTAATGGCACCATTGACCCTCCGATGCAGCACGTTGGCATAAACGATAACTCTCTCAAATCCGTCACTTTTGCCAAGCTCGACATTGACAAAAACCTTGGAAAGAAATGTAACGTTTTGATAACCTACACTTCTTCCAACAAGACCCTCTTTGTGGCTTGGTCCTTCAACGGAACACCAACCTCACATTCCAGTTCTTCACTATCTTACCCGATTGACCTCATGGAAATTCTACCCGAGTGGGTGGATATTGGGTTCTCCGCTTCAACAGGCGAATTAACTGAACACAACGTTATTCACTCGTGGGAGTTTAGCTCAACGTTGAATTCCGATGCTACGGATAATTCCTCTGGTGAGGGGAACGGAAAACGAAAAGTTTTGGTGATTGCAGTGGCGACTTCTTCGGCGGTCTTGGTGGCCGTGGTTGCGAGTGTTGCAGTTTGGGCAATGATGATGAAGAAAAGAAGGGATAAGGTTCGTAATAGTAGGGATGGTGAAGGTGGAACGAACTTGGTTAAGTTTGATTTGGATAGGGAAACTATACCAAGAAGGTTTGATTACAAAGAACTACTTGCAGCCACCAACGGATTCGCAGATGATCGAAAGCTTGGACGAGGAGCGTCGGGACAGGTGTACAAAGGGATTCTGAGTTATTTAGGAAGGGTTGTTGCTGTGAAAAGGATTTTCACCAACTTTTCAAATTCAGAGAGAGTTTTCACCAATGAGGTTAGGGTTATAAGCCGTCTTATACACAGAAACTTGGTGCAGTTCGTAGGATGGTGTCACGAGCATGGTGAGTTTCTGTTGCTTTTTGAATACATGCCCAATGGAAGTCTCGACACTCATCTCTTTGGGGACAAAAAACCTTTGACCTGGGATGTTAGGTACAAGGTGGCATTAGGAGTGGCTGCAGCAGTTCGTTATCTTCATGAGGATGCGGAGCAGTGTGTTCTTCACAGGGATATTAAATCAGCAAATGTATTGTTGGACACAGATTTTAGCACAAAGCTTGGAGATTTTGGAATGGCAAAGTTTGTGGATCCGAGGTTGAGGACTCAAATGACAGGGGTGGTGGGGACTTACGGGTACCTTGCCCCAGAATACATCCACGGAGGTAGGGCTAGTAAGGAATCAGACATTTATAGTTTTGGGGTTGTAGCTCTTGAAATTGCATGTGGAAGGAGGACCTACAAAGATGGAGAGTTTCATGTGCCTCTTGTGAACTGGGTGTGGCAACAATATATGGAAGGGAATGTTCTGAATGTTGCTGATGAGAGACTGTATAGGGATTTTAATGTAGATGAAATGAGAAGCTTGATCATTGTGGGGTTGTGGTGTACTAACCCTAACGACAAGGAAAGACCAACGGCTACACAAGTAATAAGAGTTCTTGAGCTAGAAGCGCCATTGCCAGAGCTTCCTCTTGATATGCATGACCATCTTCCTCCTTCTCTAGCTACGCATTCACAACAGACTAATTCTCAGTCCATACCTTCATTACCTTTTACTCACAGTTTCACAAGTGATGGGCGTTAG 2361 0.4485 MILFWVASYRPRKEPSEVGICGKSIRRVF*A*RLAINGSSISILDDWVEHNRSVLNLGYASVSNDACIFSVVKVSYGEGKWLSQVYWKDTEDEEQKKSFGVILELSRDTRNIGEKKKQQLRMRMRLLEMMTMFVLVLALHPPFLKTVESLNFNITNFEDPESAKNMAYVGDGRASNGSVELNIVDYLFRVGRALYAKPLRLWDQSSNVLTDFTTHFTFSIDRAKNGTYADGFAFYMAPHGYPIPPNSGGGTFALFNTTSNNFIPQNHVLAVEFDTFNGTIDPPMQHVGINDNSLKSVTFAKLDIDKNLGKKCNVLITYTSSNKTLFVAWSFNGTPTSHSSSSLSYPIDLMEILPEWVDIGFSASTGELTEHNVIHSWEFSSTLNSDATDNSSGEGNGKRKVLVIAVATSSAVLVAVVASVAVWAMMMKKRRDKVRNSRDGEGGTNLVKFDLDRETIPRRFDYKELLAATNGFADDRKLGRGASGQVYKGILSYLGRVVAVKRIFTNFSNSERVFTNEVRVISRLIHRNLVQFVGWCHEHGEFLLLFEYMPNGSLDTHLFGDKKPLTWDVRYKVALGVAAAVRYLHEDAEQCVLHRDIKSANVLLDTDFSTKLGDFGMAKFVDPRLRTQMTGVVGTYGYLAPEYIHGGRASKESDIYSFGVVALEIACGRRTYKDGEFHVPLVNWVWQQYMEGNVLNVADERLYRDFNVDEMRSLIIVGLWCTNPNDKERPTATQVIRVLELEAPLPELPLDMHDHLPPSLATHSQQTNSQSIPSLPFTHSFTSDGR* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1685 784 PANTHER PUTATIVE-RELATED 140 753 - -
Vra6g1685 784 Gene3D Transferase(Phosphotransferase) domain 1 547 752 - -
Vra6g1685 784 SUPERFAMILY Protein kinase-like (PK-like) 453 772 IPR011009 -
Vra6g1685 784 CDD lectin_legume_LecRK_Arcelin_ConA 148 381 IPR001220 GO:0030246
Vra6g1685 784 MobiDBLite consensus disorder prediction 752 784 - -
Vra6g1685 784 Gene3D Phosphorylase Kinase; domain 1 439 546 - -
Vra6g1685 784 SUPERFAMILY Concanavalin A-like lectins/glucanases 146 387 IPR013320 -
Vra6g1685 784 PANTHER - 140 753 - -
Vra6g1685 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 590 602 IPR008271 GO:0004672|GO:0006468
Vra6g1685 784 SMART serkin_6 470 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g1685 784 ProSitePatterns Protein kinases ATP-binding region signature. 476 499 IPR017441 GO:0005524
Vra6g1685 784 MobiDBLite consensus disorder prediction 757 784 - -
Vra6g1685 784 ProSitePatterns Legume lectins alpha-chain signature. 351 360 IPR000985 -
Vra6g1685 784 ProSiteProfiles Protein kinase domain profile. 470 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g1685 784 ProSitePatterns Legume lectins beta-chain signature. 267 273 IPR019825 -
Vra6g1685 784 Gene3D - 145 392 - -
Vra6g1685 784 Pfam Legume lectin domain 147 388 IPR001220 GO:0030246
Vra6g1685 784 Pfam Protein kinase domain 471 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1685 Vra-Chr6 32886640 32927636 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1685 127 750 Receptor kinase-like Gene Family AT5G10530 45.426 7.55e-174 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vra6g1685 Pkinase 8.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1685 - - vra:106763732 1509.58