Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1670 ATGGCATTGTTCCGCAAGTTCTTCTATAAGAAGCCCCCAGATGGGCTTCTAGAAATCACTGAAAGGGTTTATGTCTTTGATTACTGCTTTACCACGGATGTTATGGAAGAAGAAGAATATAGAGTGTATCTAGGAGGAATAATTGGGCAACTTCGTGGTCACTTCCCTGATGCTTCATTTATGGTGTTCAACATGAGGGAGGGAGACTGCCAAAGCCAGATTTCAAACATTTTGTGTGACTATGATATGACTGTGATAGACTATCCTCGACAGTATGAAGGGTGCCCATTGCTTACCATGGAGATGATCCATCATTTCTTGAGATCAGGTGAAAACTGGCTTGAACTTGGGCATCACAATGTTGTCTTGATGCATTGTGAACGAGGTGGGTGGCCGTTATTAGCATTTATGCTGGCTGCACTCTTGATTTATAGAAAGATGTTTACAGGGGAGCAAAAAACACTAGACATGATATACAAGCAAGCTCCTCGGGAACTTCTGCAGTTGATGTCACCTTTGAATCCTTTACCTTCACAATTGAGATATCTTCAGTACATATCAAGAAGAAATGTTGGTTCAGAATGGCCTCCTCTTGATAGGGCACTTACATTGGACTGTGTAATTATAAGACTTATTCCTAACATGGGTGGAGAGGGTGGCTGCCGTCCTATATTTAGAATATATGGGCAAGACCCTTTTATTCCTGCAGATCGAACTCCCAAAGTTCTCTTCTCAACTCCAAAAAGGAGCAAACTTGTTCGCTACTGTAGGCAGTCTGACTGTGAACTGGTTAAGATTGACATCCACTGTCATGTTCAAGGTGATGTCGTTTTTGAGTGTATTCATCTGCACAGTGATTTAGAGCATGAAGAAATGATGTTTCGGGTGATGTTTAATACAGCATTCATAAGATCAAATATTTTGATGCTTAACCGTGATGAAATTGACATACTATGGAATGCTAAAGATTGCTTCCCTAAGAATTTTAGAGTGGAGGTTCTTTTCTCAGATATGGATGCTTCAACTTCTGTTATTTCAATTGATCTGCCTCATGTTGAGGAGAAAGATGGCCTCCCTGTTGAAGCATTTGCGAAGGTCAAGGAGATTTTCAGCAATGTGGATTGGCTAGACTCAAAGGAAGAAGTAGCAAGTGTGCTCCAACAGATCACATCTTCAAATATCCTTCTGGAAAGATTTGAGTCTGGGGTTTCTGCTGCAACAAGTGACTTGCAAAAGGAGTCATCTGAAAAGTCTACAGCTGTTTTGAAGGCACACAGTGATACAAACATTCAAGCTTCTGCAGTTCAGGGGAAACATTCTACATCCTCATTAGGATCGTCTTTGGATTTTGCTATGGGAAATAAGACTGAACCATTAGAGTCAAAGACATTGTCCAAAAATGACATTGAGACTCTTGAATGTTCAGGTCAAGGGAACCAACCTATTCACTCATTTGGGCTTTCAAAAGATTCAGATTCTACTAAAAGGGGGACTGAGTCATCAGAATCCAAGGAGAAGGATATTGAGTCATTAGCATCCACTGATGCAGATTCATTGGCAAAGAAGACTGATTTGTTAGGATCAAAGGAGAAAACATTTGAGTCACTCAACTCCGAGGCATTTTTGGAAAATGATAGCAGATTCAAATGTGAACCTAGGCCACTTGCAGAAATTGATAACTCATCTGGTAGTGCTCCTATGGAAAAGAACAATGACCCTCTAGAATTAAAGGTATCACCAGAAAATACCCTCAAGACTTCTGCTTCCACGAGTCAGGGGAAACGGCTTACTCCCTCATTTGGACTCATATCAGATTCTAGTTCTCCTAAAAAGCCTGTTGAATCATTAGACAATGCCAAGGTTCCAACATCTATGCCTCTTGTGGCGAAGTCTATGCCCTCAATTGAACCATATAAGGATGCATATTCAATGACACAGGACATGGGACCATTAGAAACAAAGTCATTAACGGATGGAAATTCAATAAAAGAGAAAATGGGGCAATTAGAGCAAATCGTATTGTCAGAAAATGATACCAAGAGTGTCACATCCACAGCTCAGGGGAAACAATATAGTCCTTTACTTGAACAGCCTGTTGAAGCAAGCACAATTAAAACGAAAATTGAACCTCATGAATTGCAGGTTTCCCTCCAGCTTCCCACTCAATCAAAAATAATTTCTTCACCGGTGCGTCCAGCTGTCCGATCTGCTTCTGCTTCCACTTCTTATTTTAACTCCTTAAAAGGTTCACCTGTAGCTATCTCAAGATATCGTAGTGCACCATCAGCTCTTGGAATAACATCTGTGTTGCAGGATCATGCAGCAGTGGATATCAAAGAAGTAACTCATGCAGTCACAGTATCTCCTCCAGCTTCTGTGTTGCCTCCTTCAGACTCCAAGGTGTTAAATTCTGTAGAGCCTAGTCCTGCAGCTGTTCCTCCAGCATCGTCATCGCCTTTGCATCCATCTTTACCGTTAAAAACTTCAGTTGATGCTCTTAAAACCACGGAAAAGACTTTTGAATCCCTTTCTCCTGCAGTTGTAACTACATCACCACCTCCACCACCACCATCTTCTCAATGTGATCACACTTCAAATTTGATGCAATCTAATGCTACTCAGTACCCTGAGAATACAAATGAAGGTAAGAAACCATTGGTTGGTCCTCCTCCTCCTCCTCCATCCCCTTCAATGCTCGCTCCTCCAACCCCATCATTTTCTCCAGCCCCTTCCCTTCCTGAAACATCAGTTTCCACAACCCAAGGTTCATGTAAAGGTCCTCCTGCACCACCACCTCCACCTGCGCTGTCTGGGTTTCCTTCGTCATTGGGTATAAATGAATCAGTTGCTATACCTGGCCCTCCTCCTCCTCCCCCGCCTCCACCCCCTAGCCTTTCAAGTTCAGCACCACCATTAGCACCACCACCACCACCCCCTCCTTCCGCTTCTGCATTCCAAAATTCTTTGTCTGAGAACTCCAAAAATGGTCCTCCTGTACCCCCACCTCCACCTCCTAGCCTTCCTGGTTCAACTCTATCACCTTCAGCGCCGCCACCACCCCCTCCTCCAGGTTCTGCATCCCAAAATTCTTTGTCTAGCTCCACAAATGTTCCACCTGTACCCCCACCTCCCCTTTCTGCCAATGGATTGTCAAAACCTGGAGTTCCTGGACCACCTTCTGTTCCTGGACCACCTTCTGCTCCCGGACCACCTTCTGCTCCTTTTGATGCAAAGGGTCGTGGCCTGATGCGAGCTAATGCGAAATTTCAGTCTAAGAGGAGCAATCTGAAACCTTACCATTGGCTAAAATTAACAAGGGCGATGCAAGGAAGCTTATGGGCTGAGACACAGAAACTAGATGAATTTTGTAGGGCTCCAGAGTTTGACATGTCAGAACTTGAAACTTTGTTCTCCGCAGCTTCTCCAGCTGCTAGTGATGGAAAAGGAGGAAAGTCAAATCGCCGTGCCTCTGGGCAAAAAGTTGAGAAAGTTCAACTGATTGAGCTCAGGCGGGCCTATAACTGTGAGATCATGCTTACAAAAGTCAAAATTCCTTTGCCTGATTTGATGAGTGCTGTGCTTGCAATGGATGATACAGTATTAGATATCGATCAAATTGAGAACCTCATAAAATTCTCTCCAACCAAAGAAGAGATGGAAACACTCAAGAACTATGCCGGGAATAAGGACAACTTGGGAAAGTGTGAGCAGTTCTTCTTAGAATTGATGAAAGTGCCAAGAGTGGAAAGCAAGCTAAGAGTTTTCTCTTTTAAGATGCAATTCCTGTCCCAGGTTTCAGAGCTTAAAAGAGATTTGAATATTGTGAATTCTGCATCTGAAGAGATAAGGAATTCAGTCAAGTTGAAAAGAATCATGCAGACTATTCTTTCTCTGGGTAATGCTTTGAACCATGGAACTGCAAGAGGTGCGGCTGTTGGGTTTCGATTGGATAGTCTCCTTAAACTGACTGATACAAGATCAAGAAATAACAAGATGACTCTTATGCATTATCTCTGTAAGGTGCTTGCTGAAAAACTAGGAGAACTTCTCGATTTCCATAAAGACCTACTGAGTTTGGAGGCGGCAAGCAAGATACAATTAAAATACTTGGCAGAGGAAATGCAAGCTATTAGTAAAGGACTGGAGAAAGTAGTTCAGGAATTGACTGCATCAGAGAATGATGGACCTGTGTCAGAATACTTCTGCCAGATTCTGAAGGAATTTCTTTCTTATGCTGAATCTGAAGTAAGGTCCTTGGCTCAACTTTATGCCAACGTGGGTAGAAATGCAGATGCATTGGCTTTATACTTTGGTGAAGATCCAGCACGTTGTCCATTTGAACAAGTTGTATCTACGCTGCTCAACTTTGTGAGGTTGTTCGTAAAAGCACATGAGGAAAATTGCAAGCAGATTGAACTAGAGAGAAAAAGAGCAGAGAAGGAAGCAGAGAATGAGAAGTTGAAGCTAGCTGCTGCCAAGAAGGAGTCTGAACAGATGATGAGGACCACTATAAAGAGTGGGGATATTAAATGA 4533 0.428 MALFRKFFYKKPPDGLLEITERVYVFDYCFTTDVMEEEEYRVYLGGIIGQLRGHFPDASFMVFNMREGDCQSQISNILCDYDMTVIDYPRQYEGCPLLTMEMIHHFLRSGENWLELGHHNVVLMHCERGGWPLLAFMLAALLIYRKMFTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIIRLIPNMGGEGGCRPIFRIYGQDPFIPADRTPKVLFSTPKRSKLVRYCRQSDCELVKIDIHCHVQGDVVFECIHLHSDLEHEEMMFRVMFNTAFIRSNILMLNRDEIDILWNAKDCFPKNFRVEVLFSDMDASTSVISIDLPHVEEKDGLPVEAFAKVKEIFSNVDWLDSKEEVASVLQQITSSNILLERFESGVSAATSDLQKESSEKSTAVLKAHSDTNIQASAVQGKHSTSSLGSSLDFAMGNKTEPLESKTLSKNDIETLECSGQGNQPIHSFGLSKDSDSTKRGTESSESKEKDIESLASTDADSLAKKTDLLGSKEKTFESLNSEAFLENDSRFKCEPRPLAEIDNSSGSAPMEKNNDPLELKVSPENTLKTSASTSQGKRLTPSFGLISDSSSPKKPVESLDNAKVPTSMPLVAKSMPSIEPYKDAYSMTQDMGPLETKSLTDGNSIKEKMGQLEQIVLSENDTKSVTSTAQGKQYSPLLEQPVEASTIKTKIEPHELQVSLQLPTQSKIISSPVRPAVRSASASTSYFNSLKGSPVAISRYRSAPSALGITSVLQDHAAVDIKEVTHAVTVSPPASVLPPSDSKVLNSVEPSPAAVPPASSSPLHPSLPLKTSVDALKTTEKTFESLSPAVVTTSPPPPPPSSQCDHTSNLMQSNATQYPENTNEGKKPLVGPPPPPPSPSMLAPPTPSFSPAPSLPETSVSTTQGSCKGPPAPPPPPALSGFPSSLGINESVAIPGPPPPPPPPPPSLSSSAPPLAPPPPPPPSASAFQNSLSENSKNGPPVPPPPPPSLPGSTLSPSAPPPPPPPGSASQNSLSSSTNVPPVPPPPLSANGLSKPGVPGPPSVPGPPSAPGPPSAPFDAKGRGLMRANAKFQSKRSNLKPYHWLKLTRAMQGSLWAETQKLDEFCRAPEFDMSELETLFSAASPAASDGKGGKSNRRASGQKVEKVQLIELRRAYNCEIMLTKVKIPLPDLMSAVLAMDDTVLDIDQIENLIKFSPTKEEMETLKNYAGNKDNLGKCEQFFLELMKVPRVESKLRVFSFKMQFLSQVSELKRDLNIVNSASEEIRNSVKLKRIMQTILSLGNALNHGTARGAAVGFRLDSLLKLTDTRSRNNKMTLMHYLCKVLAEKLGELLDFHKDLLSLEAASKIQLKYLAEEMQAISKGLEKVVQELTASENDGPVSEYFCQILKEFLSYAESEVRSLAQLYANVGRNADALALYFGEDPARCPFEQVVSTLLNFVRLFVKAHEENCKQIELERKRAEKEAENEKLKLAAAKKESEQMMRTTIKSGDIK* 1511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1670 1510 MobiDBLite consensus disorder prediction 475 516 - -
Vra6g1670 1510 PANTHER FORMIN-J 1 934 - -
Vra6g1670 1510 PANTHER FORMIN-J 991 1503 - -
Vra6g1670 1510 MobiDBLite consensus disorder prediction 788 826 - -
Vra6g1670 1510 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Vra6g1670 1510 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Vra6g1670 1510 MobiDBLite consensus disorder prediction 950 983 - -
Vra6g1670 1510 Gene3D Formin, FH2 domain 1105 1501 IPR042201 -
Vra6g1670 1510 MobiDBLite consensus disorder prediction 995 1026 - -
Vra6g1670 1510 Coils Coil 1461 1502 - -
Vra6g1670 1510 SMART it6_source 454 1508 IPR015425 -
Vra6g1670 1510 MobiDBLite consensus disorder prediction 910 924 - -
Vra6g1670 1510 PRINTS Proline rich extensin signature 806 822 - -
Vra6g1670 1510 PRINTS Proline rich extensin signature 845 857 - -
Vra6g1670 1510 PRINTS Proline rich extensin signature 878 894 - -
Vra6g1670 1510 PRINTS Proline rich extensin signature 900 917 - -
Vra6g1670 1510 PRINTS Proline rich extensin signature 954 979 - -
Vra6g1670 1510 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1162 1486 - -
Vra6g1670 1510 MobiDBLite consensus disorder prediction 554 619 - -
Vra6g1670 1510 MobiDBLite consensus disorder prediction 841 1079 - -
Vra6g1670 1510 MobiDBLite consensus disorder prediction 861 880 - -
Vra6g1670 1510 Pfam Formin Homology 2 Domain 1091 1460 IPR015425 -
Vra6g1670 1510 MobiDBLite consensus disorder prediction 489 512 - -
Vra6g1670 1510 MobiDBLite consensus disorder prediction 885 909 - -
Vra6g1670 1510 Gene3D - 196 341 - -
Vra6g1670 1510 Gene3D Protein tyrosine phosphatase superfamily 12 191 IPR029021 -
Vra6g1670 1510 MobiDBLite consensus disorder prediction 1036 1072 - -
Vra6g1670 1510 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Vra6g1670 1510 MobiDBLite consensus disorder prediction 1491 1510 - -
Vra6g1670 1510 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Vra6g1670 1510 MobiDBLite consensus disorder prediction 576 613 - -
Vra6g1670 1510 SMART PTEN_C2_2 197 337 IPR014020 -
Vra6g1670 1510 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1086 1486 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1670 Vra-Chr6 32665021 32685687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1670 664 855 FH2 protein (formin) Gene Family AT2G25050 31.343 6.67e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1670 - - var:108338170 2556.17