Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1622 ATGCTTTTGTTTTGCATATATTCATTCATCACTGACAAGTTGAAGGTTGCATTTTTCCAAGTTTCAATCTTCACTCACCAAACCATGTCAGGCAATCATCACTTCCTTCTCTTCATCTTCTTCACCACCTTCTCCTTCTTCTCTCCCATTCATTCCCTCTTCTTCAACATAACCAACTTTGATGATCCAACAACCTCGTCCGACATATCCTACCAGGGTGATGGAAGATCAACCAACGGCTCCATCGACCTCAACAAAGTTAGCTACTATTTTCGTGTCGGAAGGGCTCTCTACTCCAAACCCCTCCACCTCTGGGACCCATCTTCCAATGTAGTCACCGACTTTGTCACACGCTTCACCTTCTCCATTGATAGAGTAAACAACTCTGAGACCTCTTATGCAGATGGCTTTGCGTTTTACCTAGCTCCTCTTGGCTACCAGATCCCACCAAATTCTGCAGGTGGCACCTTTGCCCTCTTCAACGCCACCACAAACAGTGAACTCCCTGAAAACCATGTTTTTGCTGTGGAGTTTGACACCTTCATTGGCTCCACTGATCCCCCAATGAAACATGTCGGTGTAGACGACAACTCTTTAACCTCTGTGGCGTTTGCGAACTTTGACATCGACAAGAACCTCGGAAAAATGTGTCACACTTTGATCACCTACACCGCCTCCACTCAAACCCTCTTTGTTGCTTGGTCCTTCAAAGGAATACCAACCACAAAGGACAACGACAACAACTCCTCTCTGTCTTACCAGATCGACCTCAAGAAAATTCTTCCAGAGTGGGTCAATATTGGTTTCTCTGCCTCAACCGGACTTTACACTGAACACAATGTTATTTATTCGTGGGAGTTCAACTCCACTTTGAAAGATTCCTCCGTGGATAATGAGGGTGTGAAACTAAAACACAAAGGGTCAAAGCTTGTGTTAATAGTTGCGGTTCTCTGTCCACTGGTTCTTCTTTTAGTGGCGGCGAGTATTTTTGTCTTCGTGTTGATAAGGAAAAAGAGAAGAATGGATGATTGTATGTTATATGATGTTGGAGACGACGAGGTGGGTCCAACTTCAGTTAAATTTGATCTGGATAGAGGAACTATCCCGAGAAGATTCGAGTACAAAGAGCTTGTGGATGCCACTAACGGTTTTTCAGACGAAAGAAGGCTGGGACAAGGAGCTTCGGGGCAGGTATACAAGGGTGTGTTGAGTTACCTGGGAAGAGTTGTGGCGGTGAAGAGAATATTTGCAGACTTCGAGAATTCAGAGAGAGTGTTCACGAACGAGGTGAGGATAATAAGCCGTTTAATCCACAAAAACTTGGTCCAGTTCATAGGGTGGTGTCACGAAGAAGGTGAATTTATGTTGGTTTTCGAGTACATGCAAAATGGAAGCCTAGACTCTCATTTGTTTGGAAACAAGAGGATTTTGGAGTGGCGTGCGAGGTACAAGATTGCTTTAGGTGTGGTAACTGCGCTTCAATATCTTCACGAGGACGCAGAGCAATGTGTGCTACACAGGGACATAAAATCAGCGAATGTGTTGTTGGACATGGAATTCAACACAAAGGTGGGGGATTTTGGCATGGCGAAATTGGTGGATCCAAGGCTGAGAACTCAACGAACTGGGGTGGTTGGAACTTATGGTTACTTAGCACCTGAATATGTGAACGGAGGAAGAGCAAGCAGGGAATCAGATATATACAGTTTTGGAGTGGTGGCATTGGAGATAGCAAGTGGGAGGAGGACATACCAAGATGGTGAGTTTCATGTTAGTTTGATGAATTGGGTGTGGCAGCTTTATGTGGAAGGAGAACTTATGAGAGCTGCAGATGAGAAACTGAAAGAGGAGTTTGATGAGAATGAGATGAGAAGTTTGCTTGTGGTGGGTTTGTGGTGCACAAACCCTAATGATAAAGAGAGGCCTAAGGCTGCAGAAATCATGAAGGTTTTGCAGCTTCAATCACCATTGCCGCTGCTTCCACTTGATATGTATGAACGTGCTCCTCCCATGCAACCCATTAGGATGCCACATCATCATTCAGGCCAATCTTCACCCATTACTAATAGTCTTGTTAGTGTTGGAAGATAG 2091 0.4467 MLLFCIYSFITDKLKVAFFQVSIFTHQTMSGNHHFLLFIFFTTFSFFSPIHSLFFNITNFDDPTTSSDISYQGDGRSTNGSIDLNKVSYYFRVGRALYSKPLHLWDPSSNVVTDFVTRFTFSIDRVNNSETSYADGFAFYLAPLGYQIPPNSAGGTFALFNATTNSELPENHVFAVEFDTFIGSTDPPMKHVGVDDNSLTSVAFANFDIDKNLGKMCHTLITYTASTQTLFVAWSFKGIPTTKDNDNNSSLSYQIDLKKILPEWVNIGFSASTGLYTEHNVIYSWEFNSTLKDSSVDNEGVKLKHKGSKLVLIVAVLCPLVLLLVAASIFVFVLIRKKRRMDDCMLYDVGDDEVGPTSVKFDLDRGTIPRRFEYKELVDATNGFSDERRLGQGASGQVYKGVLSYLGRVVAVKRIFADFENSERVFTNEVRIISRLIHKNLVQFIGWCHEEGEFMLVFEYMQNGSLDSHLFGNKRILEWRARYKIALGVVTALQYLHEDAEQCVLHRDIKSANVLLDMEFNTKVGDFGMAKLVDPRLRTQRTGVVGTYGYLAPEYVNGGRASRESDIYSFGVVALEIASGRRTYQDGEFHVSLMNWVWQLYVEGELMRAADEKLKEEFDENEMRSLLVVGLWCTNPNDKERPKAAEIMKVLQLQSPLPLLPLDMYERAPPMQPIRMPHHHSGQSSPITNSLVSVGR* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1622 696 SUPERFAMILY Protein kinase-like (PK-like) 368 674 IPR011009 -
Vra6g1622 696 ProSitePatterns Legume lectins alpha-chain signature. 261 270 IPR000985 -
Vra6g1622 696 PANTHER PUTATIVE-RELATED 38 666 - -
Vra6g1622 696 CDD lectin_legume_LecRK_Arcelin_ConA 55 291 IPR001220 GO:0030246
Vra6g1622 696 Gene3D Transferase(Phosphotransferase) domain 1 461 656 - -
Vra6g1622 696 MobiDBLite consensus disorder prediction 670 696 - -
Vra6g1622 696 PANTHER - 38 666 - -
Vra6g1622 696 Gene3D - 51 304 - -
Vra6g1622 696 Gene3D Phosphorylase Kinase; domain 1 369 460 - -
Vra6g1622 696 MobiDBLite consensus disorder prediction 678 696 - -
Vra6g1622 696 SUPERFAMILY Concanavalin A-like lectins/glucanases 51 291 IPR013320 -
Vra6g1622 696 SMART serkin_6 384 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g1622 696 Pfam Legume lectin domain 54 295 IPR001220 GO:0030246
Vra6g1622 696 Pfam Protein kinase domain 385 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g1622 696 ProSiteProfiles Protein kinase domain profile. 384 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g1622 696 ProSitePatterns Protein kinases ATP-binding region signature. 390 413 IPR017441 GO:0005524
Vra6g1622 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1622 Vra-Chr6 31879015 31881381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1622 36 664 Receptor kinase-like Gene Family AT5G10530 44.113 2.44e-178 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vra6g1622 Pkinase 8.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1622 - - vun:114193012 1286.55