Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1591 ATGTCCAAAGAAGTTGTTGATGATCCTTCAGCTGCTCCTTTTGAGTTTGAGATCTTGGATAGTGATTCTTACATTGTTAGATCTGTTAGAGCCTCAACCAATCGTGCAAATCCGTGGATTGAACCTGAAAGGCTGAAACTTAGACACAGAATTGGTAGAGGCATCTTTGGTGATGTTTGGTTAGCAACTCATCATCAGTCAACTGAAGATTACGATGAGTACCATGAAGTTGCTGCAAAGATGTTACATGCAATTGGAGAGGATCACATGAAGACTGTTATAGAGAAGTTCAATGAATTGTATTTTAAGTGCCAAGGAGTTGCTAGCATGTCCTGGCTGCATGGAATTTCCATCTTAGAAGGAAGGATATGCATCATTATGAATTTTTACGTTGGTTCAATTGGTGACAAGATTGCAAGACTCAAAGAAGGAGGGATTTCATTGCATGATGTTTTAAGGTATGGAGTCAATCTGGCTCAAGCTGTTCTGGAACTTCACTCTCTAGGGATCCTCATTCTTAACCTTAAACCATTCAATGTTGTTCTCAATGAGAACGATCAAGCAATTTTAGGAGATTTTGGAATTCCTAGTCTTTTGCTTGAATCCTCATTCTTAAGCAGAGATATGGATAAGAGGCTTGGAACACCAAATTACATGGCTCCAGAGCAATGGGAACCTGAGGTCAGAGGTCCTATATCATTTGAAACAGATTCTTGGGGGTTTGGTTGTACCATTGTCGAAATGTTGACTGGTAATCAACCTTGGTATGGATGTCCTGTTCCCAGAATATACCAGTCAGTTGTTGAAAAGCATGAAAAACCCAATATTCCTAGTGGCCTTCCTTCTTCAATTGAGAATATCCTCAGTGGATGCTTTGAGTATGATTTGAGGAATCGCCCTTTAATGGTGGATATTCTGAGTGTCTTTCAAAGTGCTCTGAATGAATTGGCCAATGATGGAGAATGGAGATATCTGGGAAATGTGAAAGTTAATCCAAAATCAGATAGCACTGGCTACACAGAGTGGTTCCTCTCAAAGGATCATCTTCAGGTGGGTGACATGGTCCGAACTAGAAAGCTTCCCAATTCATGCAGACCTCAAAACATGGACATCCCAGAAGGAACTGTTGTCAGTTTAGAGTCTAACACAGATCACAGGTTCGCCCTTGTGAGGGTCCATGGCAATGACGACCCTATCAGAATTCATGTATCATCCCTTGAACGTGTCACGTCTGGATTGGTAGCTGGTGATTGGGTATGTTTGAGGGAAGAAAACGAGAAGCACTCACATGTGGGCATTCTACATGCCATCAACCGTGAAGGTAGTGTATCTGTTGGATTTCTTGGGCTGCAAGCTCTCTGGGATGGAAACTCTTCTGAAGTGGAAAAGGTGGAACCTTTCTGTGTTAGCCAGTTTGTGAGAGTCAAAGACGCCGTTTCGTGTCCTCGATTTGAGTGGCGTCGCAAAAGGGGCGGCGCCTGGGCTGCTGGCAGGATCTCATGGATTCTTCCGAATGGAGGTTTGGTTGTGAAGTTCCCAGGGATGCTTCCTTTTGGCAATGAAGCAAACACCTACTTGGCTGATCCCTCTGAGGTTGAAGTGGTTGAGTTCAGGAATTGTCCAGGGATCATAGAAAAGTATGAACATTTAGAGGATCATCACTGGGCAATTAGACCAGTTCTGGTTGCATTTGGTCTATTCACTGCTTTCAAATTTGGCATACTTGTTGGAAAGAAAGTGAGGAGGAACAACAAGGTCAATGCAGTAGAAATTGAAAGTCATCATCAGAATGACAATTCTGCTACAACAACTTCTACCACCACAATGAGATCTTCAAATGCTGCAAAACAAGGCAATGGAACATGGGTTCCTTCAGTTTTTGCAAGTATAATTTTTAAGGAAGTTGGTAACTCATCCAACGGTCGGTAG 1929 0.4251 MSKEVVDDPSAAPFEFEILDSDSYIVRSVRASTNRANPWIEPERLKLRHRIGRGIFGDVWLATHHQSTEDYDEYHEVAAKMLHAIGEDHMKTVIEKFNELYFKCQGVASMSWLHGISILEGRICIIMNFYVGSIGDKIARLKEGGISLHDVLRYGVNLAQAVLELHSLGILILNLKPFNVVLNENDQAILGDFGIPSLLLESSFLSRDMDKRLGTPNYMAPEQWEPEVRGPISFETDSWGFGCTIVEMLTGNQPWYGCPVPRIYQSVVEKHEKPNIPSGLPSSIENILSGCFEYDLRNRPLMVDILSVFQSALNELANDGEWRYLGNVKVNPKSDSTGYTEWFLSKDHLQVGDMVRTRKLPNSCRPQNMDIPEGTVVSLESNTDHRFALVRVHGNDDPIRIHVSSLERVTSGLVAGDWVCLREENEKHSHVGILHAINREGSVSVGFLGLQALWDGNSSEVEKVEPFCVSQFVRVKDAVSCPRFEWRRKRGGAWAAGRISWILPNGGLVVKFPGMLPFGNEANTYLADPSEVEVVEFRNCPGIIEKYEHLEDHHWAIRPVLVAFGLFTAFKFGILVGKKVRRNNKVNAVEIESHHQNDNSATTTSTTTMRSSNAAKQGNGTWVPSVFASIIFKEVGNSSNGR* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1591 642 ProSiteProfiles Protein kinase domain profile. 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g1591 642 PANTHER OS06G0639500 PROTEIN 1 637 - -
Vra6g1591 642 Gene3D Phosphorylase Kinase; domain 1 23 129 - -
Vra6g1591 642 ProSitePatterns Protein kinases ATP-binding region signature. 51 80 IPR017441 GO:0005524
Vra6g1591 642 PANTHER OS06G0639500 PROTEIN 1 637 - -
Vra6g1591 642 Gene3D Transferase(Phosphotransferase) domain 1 132 336 - -
Vra6g1591 642 Pfam Protein tyrosine and serine/threonine kinase 45 307 IPR001245 GO:0004672|GO:0006468
Vra6g1591 642 SUPERFAMILY Protein kinase-like (PK-like) 42 309 IPR011009 -
Vra6g1591 642 MobiDBLite consensus disorder prediction 593 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1591 Vra-Chr6 31388763 31393536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1591 21 316 MAP Kinase Kinase Kinase AT2G17700 24.252 2.96e-19 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Vra6g1591 PK_Tyr_Ser-Thr 3.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1591 - - gsj:114393396 1037.33