Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1577 ATGGCATGGGCTTGCAAAATTGTGTTTGGGGTGCCACTGATTGTTGCACTTGTGATATGTAAATGGAGGAAAAGACATTCATCAATGTATGAAAATATTGAAAATTACCTTGAACAAAATCACTTAGCACCTATCAGATACTCATACAAGGAAATTAAAAAGATGACTGAAGGTTTCAAAGAGAAGTTAGGTGAAGGAGGATTTGGCTCTGTGTTTAAGGCAAAGTTACGGAGTGGACCTTCTGTGGCAATCAAAATGTTAGGTAAAGCCAAAGGAAATGGACAAGATTTTATCAATGAAGTTGCAACCATTGGAAGAATACATCATCAAAATGTGGTACAATTAATTGGATTTTGTGTTAGTGGCTCAAAGCGCGCTCTTTTGTATGAATTCATGTCTAATGGTTCTCTTGATAAACTTATATTTTCAAAAGAAGGAAGTGTACAATTAAGCTATGAAAAGATATACAATATATCAGTTGGAGTGGCTCGTGGGATTGCTTATCTTCACCATGGATGTGAGATGAAGATTTTGCATTTTGATATCAAACCACATAACATCTTACTAGATGAAAATTTTATCCCAAAGATTTCTGACTTTGGATTGGCAAAGTTATATCCAGTAGAAAATAGCATTGTCACTGTGACTGCAGCAAGAGGAACCATTGGATATATGGCTCCAGAATTGTTTTACAATAATATTGGAGGAATTTCCCATAAGGCCGATGTTTATAGTTTTGGAATGCTTTTGATGGAGATGGCAAGCAAGAGGAAGAACCTGAATCCCCATGCGGATAGATCAAGTCAAATTTACTTTCCATTTTGGATCTATGATCGTATTAGAGAAGAGGAAGATATAGATATACAAGATTTGACTGAAGAGGAAAAGAAAATAGCAAAGAAGATGATCATAGTTGCACTTTGGTGCATACAATTGAAACCAAATAATCGTCCCTCAATGAATAGAGTGGTAGAAATGCTTGAAGGAAATATTGAAGACCTGAAAATACCTCCAGAATCTACTTTATATCCTGATGAAATGAGTACCGACGATGATCAAACAATAAACTCAGAGTTCACCGACACATTCTCTTAA 1095 0.3562 MAWACKIVFGVPLIVALVICKWRKRHSSMYENIENYLEQNHLAPIRYSYKEIKKMTEGFKEKLGEGGFGSVFKAKLRSGPSVAIKMLGKAKGNGQDFINEVATIGRIHHQNVVQLIGFCVSGSKRALLYEFMSNGSLDKLIFSKEGSVQLSYEKIYNISVGVARGIAYLHHGCEMKILHFDIKPHNILLDENFIPKISDFGLAKLYPVENSIVTVTAARGTIGYMAPELFYNNIGGISHKADVYSFGMLLMEMASKRKNLNPHADRSSQIYFPFWIYDRIREEEDIDIQDLTEEEKKIAKKMIIVALWCIQLKPNNRPSMNRVVEMLEGNIEDLKIPPESTLYPDEMSTDDDQTINSEFTDTFS* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1577 364 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 351 IPR045874 GO:0004672
Vra6g1577 364 MobiDBLite consensus disorder prediction 341 364 - -
Vra6g1577 364 ProSiteProfiles Protein kinase domain profile. 57 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g1577 364 Gene3D Phosphorylase Kinase; domain 1 30 131 - -
Vra6g1577 364 Pfam Protein kinase domain 60 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g1577 364 MobiDBLite consensus disorder prediction 347 364 - -
Vra6g1577 364 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Vra6g1577 364 SMART serkin_6 57 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g1577 364 SUPERFAMILY Protein kinase-like (PK-like) 41 328 IPR011009 -
Vra6g1577 364 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 4 351 - -
Vra6g1577 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Vra6g1577 364 Gene3D Transferase(Phosphotransferase) domain 1 132 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1577 Vra-Chr6 31137002 31138108 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1577 2 363 Receptor kinase-like Gene Family AT5G38280 46.505 2.67e-109 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vra6g1577 Pkinase 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1577 - - gmx:121173411 594.349