Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1564 ATGTCTATAATAGCAGAAGCACCTAAATTTCTTCAAGTTTACTCAAATGGTTCTGTGAAACGCTTCGACCCTGAAACTGCCTTAGCCTCCTTAGAATCAACCGATAGGTACAAATCAAAGGATGTGATCATAGACTCATCAAAAGGTATCACAGGAAGAATCTTCCTTCCAAGTTTTCCAATTTCCTCAAAGAAACTTCCTCTCGTGGTTTATTTCCATGGTGGTGGCTTCTGCATTGGATCTACCACATGGCTTGGCTACCACACTTTTCTTGGTGACTTCTGTGTCACATCTCAGTCCATTATCCTTTCTGTTGACTATCGTTTGGCTCCAGAACACCGTCTCCCTATTGCCTATGAAGATTGCTACACCTCACTTGAATGGCTAAGTGAACAAGTTGCTTCTGAATCTTTGCTTCAACAAGCTGACACAAGTAGGGTTTTTCTCTCAGGAGATAGTGCAGGAGGTAACATTGCACATCATGTTGCAGTGAAGGCAATTCAAAGCAATGCATGCCCTTTGAGAATCACAGGGTTGATGCCAATACATCCCTATTTTGGAAGTGAGAAAAGGACCGTGAAAGAGATGGTTGATGAAAGCAAAGAAGATGTAACCATGAATGATATGTTTTGGAGGCTGAGTATACCAGAAGGCTCAAACCGTGACTACTATGGTTGTAACTTTGAAAAACATGACCTAGGTAACACTGTTTGGCTTAAATTTCCACCAACTGAGGTTTATGTTGCTGGTGAAGATTTTCTGAAGGAAAGAGGAGTGATGTATGTCGAGTTTCTAAAGAACAAAGGAGTGAAAAAGGTGACACTTGTGGAAGCAAAGGAAGAGTCTCATGTATTTCATGTATATCATCCTCTATCTCCTGCAACTCGTTCACTGCAAACTCAAATGACTACATTCATAGAAAAATATTAG 930 0.4065 MSIIAEAPKFLQVYSNGSVKRFDPETALASLESTDRYKSKDVIIDSSKGITGRIFLPSFPISSKKLPLVVYFHGGGFCIGSTTWLGYHTFLGDFCVTSQSIILSVDYRLAPEHRLPIAYEDCYTSLEWLSEQVASESLLQQADTSRVFLSGDSAGGNIAHHVAVKAIQSNACPLRITGLMPIHPYFGSEKRTVKEMVDESKEDVTMNDMFWRLSIPEGSNRDYYGCNFEKHDLGNTVWLKFPPTEVYVAGEDFLKERGVMYVEFLKNKGVKKVTLVEAKEESHVFHVYHPLSPATRSLQTQMTTFIEKY* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1564 309 Pfam alpha/beta hydrolase fold 69 286 IPR013094 GO:0016787
Vra6g1564 309 SUPERFAMILY alpha/beta-Hydrolases 37 309 IPR029058 -
Vra6g1564 309 Gene3D alpha/beta hydrolase 9 307 IPR029058 -
Vra6g1564 309 PANTHER ARYLACETAMIDE DEACETYLASE 3 306 - -
Vra6g1564 309 PANTHER CARBOXYLESTERASE 13-RELATED 3 306 - -
Vra6g1564 309 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 147 159 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1564 Vra-Chr6 30948102 30949251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1564 3 287 Carbohydrate Esterase AT5G16080 37.248 3.94e-59 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1564 - - gmx:106796748 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1564 6 30948102 30949251 Vra6g1564 6 30948102 30949251 ECH