Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1558 ATGGATTCTGAAATACTCCTTATCTTTTCCTTTCTCCTCTGCATCATTGTGGCACTCAAACTAGGGAGAAACCTCAACAAAAAAAGCAAGCCATCATCACTAAACATACCCCCTGCACCATGGAAGCTTCCTGTTATAGGAAACCTGCACCATCTTGTTTCATCCACACCACACCGAAAACTAAGAGACTTAGCCAAAATATACGGACCCATGATGCATCTCCAGCTAGGAGAGATCTTCATTATCGTTGTTTCCTCAGCAGAGTACGCCAAAGAGATCATGAAAACACATGATGCAACCTTTGCATCGAGACCTCAACTTCTGGCAGCAGATATAGCTACTTATGGATACACAAACATTGCTTTTGCACCTTACGGAAGTTACTGGAAAAAGGTACGAAGAATCTGCAACATGGAGCTTCTGTCCCCAAAACGTGTCAGTTCATTCCAACCGATTAGAGAAGAAGAACTCAGCAATCTGGTTCAAATTATCGGTTCACATGTTGGAGGGTCCCCCATCAACCTCACTGAGGCAGTGTCCTTATCAATGTATAACATCATTTCAAGAGCTGCTCTGGGGCAGAAGCGCACCAAAGACCACCATGAGTTCATGTCGATAGTCCAACATGCAGTGCTTGGTGCAGGAGGTTTTGACATAGGAGAGTTGTTTCCTTCTGCTACATGGCTTCAACATCTCACTGGTTTGAGGCCTATGCTTGAGAAGGTGAATAAACAAATCGATCGGATACTGGAAGCCATAATCAATGAACACAGAGAAGCAAGATCCAAAGCCCAACATGGCCATGAATCAAACGAAGATTTGGTAGATGTTCTCCTAAACTTCCATGATGCTAATGACAGTAACCATGAAGTTTGCTTAACCATTAACAATATCAAAGCAGTAATCACGGACATTTTTTTAGCTGGATTTGAGACTGTGAAAACTACCATAAATTGGGCAATGGCAGAGATGATGAGGAATCCAAGAGTGATGAAGAAAGCACAAGATGAGGTGAGAGAGGTGTTCAAAGAAAAGGGAAGGGTTGATGAGATTTGCATGAATGAACTACAATACTTGAAATNAGTTNTGAAAGAAACCCTAAGGTTACACCCACCAGNAGTTCTTCTGNNTCCAAGAGAATGTGNAGAGANATGTGAGATTGATGGGTATGAGATANCAGNNAAAANNAAGGTATTGATAAATGCTTGGGCAATTGGGAGAGACCCAAANTACTGGAGTGAAGCAGAGAGGTTTTATCCAGAGAGATTCATTGGCAGTTCCATTGATCTTAAAGGAAATCATTTTGAGTTCATTCCCTTTGGTGCTGGAAGAAGAATCTGTCCTGGCATTTCCTTTGGCTTGCTAAATGTTGAACTCACTCTTGCTGTTTTGTTGTTTCACTTTGATTGGAACCTTCCTGAAGGAATCAAAAGTGAAGACTTTGACATGACTGAGAAATTTGGAATCACTGTTGGATTAAAGAATGACATATTCTTGATACCTCTCACTGCTGGGAAGTGA 1521 0.4122 MDSEILLIFSFLLCIIVALKLGRNLNKKSKPSSLNIPPAPWKLPVIGNLHHLVSSTPHRKLRDLAKIYGPMMHLQLGEIFIIVVSSAEYAKEIMKTHDATFASRPQLLAADIATYGYTNIAFAPYGSYWKKVRRICNMELLSPKRVSSFQPIREEELSNLVQIIGSHVGGSPINLTEAVSLSMYNIISRAALGQKRTKDHHEFMSIVQHAVLGAGGFDIGELFPSATWLQHLTGLRPMLEKVNKQIDRILEAIINEHREARSKAQHGHESNEDLVDVLLNFHDANDSNHEVCLTINNIKAVITDIFLAGFETVKTTINWAMAEMMRNPRVMKKAQDEVREVFKEKGRVDEICMNELQYLKXVXKETLRLHPPXVLLXPRECXEXCEIDGYEIXXKXKVLINAWAIGRDPXYWSEAERFYPERFIGSSIDLKGNHFEFIPFGAGRRICPGISFGLLNVELTLAVLLFHFDWNLPEGIKSEDFDMTEKFGITVGLKNDIFLIPLTAGK* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1558 506 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1558 506 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1558 506 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1558 506 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1558 506 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1558 506 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1558 506 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1558 506 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1558 506 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1558 506 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 6 503 - -
Vra6g1558 506 Pfam Cytochrome P450 37 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1558 506 Gene3D Cytochrome P450 22 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1558 506 SUPERFAMILY Cytochrome P450 37 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1558 506 Coils Coil 239 259 - -
Vra6g1558 506 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1558 506 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1558 506 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1558 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Vra6g1558 506 PANTHER CYTOCHROME P450 71B11-RELATED 6 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1558 Vra-Chr6 30872404 30886107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1558 6 501 Cytochrome P450 AT3G26300 41.717 3.52e-132 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1558 - - gmx:100818508 688.337