Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1524 ATGGCAATGGCATACGAAAACCCTCCTTCGATTCGAACCTCAGATCCTGAAGCACAGGAAATCACTCCAACGGCTACTCCTTCGACCGGGCAACCAGGCAAAGGTTACTCAGCCAAAGTGGTGGTGAACAAAGTGAAGAACAACCTTGTTTTTCATTCAAAATGGGGTGAACTGAACGGTGCCATGGGTGATCTTGGCACTTATATACCAATAGTGTTGGCCTTGACCCTTGCCAGGGACCTCAACCTTGGCACCACACTCATCTTCACAGGTGTGTACAACATCATCACCGGAGCCATCTATGGCGTCCCCATGCCAGTCCAGCCCATGAAATCCATTGCTGCTCAGGCCTTGTCGGACAAAACCTTCGGCGTGCCGGAGATCATGGCTGCCGGTATAATAACCGGTGGGGTGCTGTTTGTTCTGGGTGTGACAGGGTTGATGCGGCTTGTGTACATGTTCATTCCTCTGTGTGTTGTGAGGGGAATTCAGCTGGCACAAGGCTTGTCTTTTGCTCTCACAGCAGTTAAGTATGTGAGGAAAGTTCAGGACTTGCCAAAGAGTAAATCTTTGGGTGAGAGACACTGGTTTGGGTTGGATGGGCTGGTTTTGGCTATTGTGTGTTTGTGTTTCATTGTGATAGTGAATGGGGCTGGGGAGAAGAATAGAGGGTGCTGTGATGGTGTGCAAAGTGGGGGTGATGATTTGGGTGGTGGCCAAAAGAGGGATGAGGTTGCAAGAACCAAGACAAGCAGGTTGAGAAGGGTTATTTTCTCACTACCTTCTGCTTTCATGGTGTTTGTGTTGGGGGTTGTTTTGGCCTTTGTGAGGAGGCATGAGGTGGTGCATGAGATAAAGTTTGGACCATCATCAATAGAGGTGGTGAAGTTCTCTAAACATGCATGGAAGAGAGGGTTTGTGAAGGGTGCAATTCCTCAACTTCCATTGTCAATTTTGAACTCTGTGGTGGCTGTTTGTAAGTTGTCATCAGATTTGTTCCCAGGGAGGGATTTCTCAGTGACTTCATTGTCAGTGACAGTGGGGTTGATGAACTTGGTTGGAAGTTGGTTTGGTGCAATGCCAAGTTGCCATGGTGCAGGTGGACTTGCAGGGCAGTACAAGTTTGGTGGTAGGAGTGGTGGTTGTGTGGCACTTCTTGGTGTTGCAAAACTGGCCTTGGGGTTGGTGTTGGGAAGTTCTTTGGCACACATTTTAAGGCAATTTCCAGTGGGATTATTAGGGGTCTTGCTACTGTTTGCTGGAATAGAACTAGCTATGTGTTGTAGGGACATGAACACAAAGGAAGATTCCTTTGTGATGCTTATTTGCACTGCAGTTTCACTTGTTGGATCAAGTGCAGCTCTTGGCTTTTTATGTGGAATGATTATTTATGTCCTTCTTAGGTTGAGGCATTGGACAAGAGACAAACCACTTTCTGCTATTTGGATGCACAAAACTCCCCAGCAAGTCTAA 1473 0.4732 MAMAYENPPSIRTSDPEAQEITPTATPSTGQPGKGYSAKVVVNKVKNNLVFHSKWGELNGAMGDLGTYIPIVLALTLARDLNLGTTLIFTGVYNIITGAIYGVPMPVQPMKSIAAQALSDKTFGVPEIMAAGIITGGVLFVLGVTGLMRLVYMFIPLCVVRGIQLAQGLSFALTAVKYVRKVQDLPKSKSLGERHWFGLDGLVLAIVCLCFIVIVNGAGEKNRGCCDGVQSGGDDLGGGQKRDEVARTKTSRLRRVIFSLPSAFMVFVLGVVLAFVRRHEVVHEIKFGPSSIEVVKFSKHAWKRGFVKGAIPQLPLSILNSVVAVCKLSSDLFPGRDFSVTSLSVTVGLMNLVGSWFGAMPSCHGAGGLAGQYKFGGRSGGCVALLGVAKLALGLVLGSSLAHILRQFPVGLLGVLLLFAGIELAMCCRDMNTKEDSFVMLICTAVSLVGSSAALGFLCGMIIYVLLRLRHWTRDKPLSAIWMHKTPQQV* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1524 490 PANTHER MOLYBDATE TRANSPORTER 1/2-RELATED 37 486 - -
Vra6g1524 490 MobiDBLite consensus disorder prediction 1 35 - -
Vra6g1524 490 MobiDBLite consensus disorder prediction 12 33 - -
Vra6g1524 490 Pfam Molybdate transporter of MFS superfamily 306 424 IPR031563 GO:0015098|GO:0015689
Vra6g1524 490 Pfam Molybdate transporter of MFS superfamily 56 171 IPR031563 GO:0015098|GO:0015689
Vra6g1524 490 PANTHER - 37 486 IPR031563 GO:0015098|GO:0015689
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1524 Vra-Chr6 30160389 30162269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1524 11 479 Inorganic Solute Cotransporters AT2G25680 63.270 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1524 - - vun:114195568 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1524 6 30160389 30162269 Vra6g1524 6 30160389 30162269 ECH
Vra6g1524 6 30160389 30162269 Vra5g1137 5 17850531 17852245 PCT