Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1485 ATGGAAGGTTCTAGAATGGAGAATTTAGTCAGAGCTGAGAAATCGCTCAGACTCAGCTTAGAGAAATCGAAGTCGGTGGGGTTGGCTTTGGAGAGAGCGGGACCGAGGTTGGCCGAAATCAGGCAGCGGCTACCGTCGTTGGGATCGGCGGTGCGGCCGATTCGCGCTGAGAGAGATGCTCTGGTGGCCGTCGGCGGCCATATCAACCGCGCTGTGGGCCCCGCCGCGGCGGTGCTCAAGGTTTTTGACGCCGTCCATGGACTGGAGAAGTCGCTGCTGTCGGATCCCCGGAGCGACATAGCCGGGTACTTGTCAGTGCTGAAACGTCTCCAGGAGGCGCTGAGGTTCTTGGGGGACAATTGCGGGTTGGCTATACAGTGGTTGGAAGACATAGTTGAGTATTTGGAAGACAATTCCGTTGCTGATCAGGTTTATCTGGCGAATTTGAAGAAGGAATTGAAGAATCTTCGCGAATCGCAGCATGGGGAACTCGATGGTGGGTTGTTGGATGCTGCATTGCGCAAGTTGGAGGATGAGTTCAGACTGCTGTTGACTGAGAATAGCGTACCACTGCCGATGTCGGCGGCGGCGGCCGGTGATGGTGTGGCATGCATTGCGCCGTCGCCGCTGCCTGTATCGATTGTGCAGAAGCTGCAGGCGATTCTGGGGCGGTTGATTGCCAATGACAGGCTGGATAGGTGTGTGGGGATTTATGTTGAGGTGAGGAGTTCGAATGTTAGGGCAAGTTTGCAGGCACTGAATTTGGATTACCTTGAGATTTCTGTGTCGGAGTTCAATGATGTACAGAGCATTGAGGGGTATATAGCTCAGTGGGGGAAGCATTTGGAGTTTGCTGTGAAGCATTTGTTTGAGGCTGAGTATAAGCTTTGCAATGATGTGTTTGAGAGGATTGGATTGGATGTGTGGATGGGTTGCTTTTCGAAGATAGCTGCGCAAGCGGGTATACTGGCGTTTCTTCAGTTTGGGAAGACAGTTACTGAGAGTAAGAAGGACCCCATTAAGCTTTTGAAGTTGCTGGATATTTTCGCGTCGCTGAGCAAGTTGAGATTGGATTTCAACAGGCTTTTTGGCGGTGGGCCATGTGTTGAGATACAGAATTTGACTAGGGATCTTATTAAGAGGGTGATTGATGGGGCTGCAGAGATTTTCTGGGAGCTTTTTGTTCAGGTGGAGTTGCAGAGGCCGAATCCACCACCAGTGGATGGCAATGTGCCGAGATTGGTGAGCTTTATCACTGATTACTGTAACAAGCTCCTTGGGGACGACTATAAGCCGATACTGACTCAGGTTCTGATAATTCACAGAAGTTGGAAGCGCCAAAGCTTTCAAGAGAAACTCCTTGTTACTGAGATTTTGAACATTGTGAAGGCTGTGGAGCAGAATGTAGAGACTTGGATCAAGGCTTATGATGATCCTATACTGTCCCACTTTTTTGCTATGAACAATCATTGGCATCTCTGCAAGCATTTGAAAGGGACAAAGCTTGGGGAACTCTTGGGGGATTCCTGGCTGAGGGAGCACGAACAGTATAAGGAGTATTACTCTACAATCTTTTTGAGGGACAGTTGGGGAAAGCTTCCTGGACATTTGAGTAGGGAAGGGTTGATTCTTTTCTCTGGAGGGCGCGCCACTGCCCGTGACCTGGTCAAGAAAAGGTTGAAGAAGTTCAATGAAGTTTTTGATGAGATGTATACTAAGCAGTCAAGTTGGATAATGCCAGAACGGGATCTGAGGGAGAAAACATGTCAGCTTATAGTGCAAGCTGTGGTGCCTGTATACCGCAGTTACATGCAGAATTATGGTCCTTTGGTGGAGCAAGATGCTAGCTCCACAAAATATGCAAAGTACACCGTTCAGAAGCTTGAGGAAATGCTCTTGTGTCTTTATCGGCCAAGGCCTGTAAGACATGGCAGCTTGAGAAGTCCAACATTTAGTGCAAAATATGGCAATGGAGTACCTGATCTTCGCAGAACAGCATCTGCAGTTGTGTAA 2013 0.4903 MEGSRMENLVRAEKSLRLSLEKSKSVGLALERAGPRLAEIRQRLPSLGSAVRPIRAERDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRSDIAGYLSVLKRLQEALRFLGDNCGLAIQWLEDIVEYLEDNSVADQVYLANLKKELKNLRESQHGELDGGLLDAALRKLEDEFRLLLTENSVPLPMSAAAAGDGVACIAPSPLPVSIVQKLQAILGRLIANDRLDRCVGIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLSKLRLDFNRLFGGGPCVEIQNLTRDLIKRVIDGAAEIFWELFVQVELQRPNPPPVDGNVPRLVSFITDYCNKLLGDDYKPILTQVLIIHRSWKRQSFQEKLLVTEILNIVKAVEQNVETWIKAYDDPILSHFFAMNNHWHLCKHLKGTKLGELLGDSWLREHEQYKEYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYTKQSSWIMPERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQDASSTKYAKYTVQKLEEMLLCLYRPRPVRHGSLRSPTFSAKYGNGVPDLRRTASAVV* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1485 670 Pfam Exo70 exocyst complex subunit 277 632 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vra6g1485 670 Gene3D Exocyst complex component Exo70 128 643 - -
Vra6g1485 670 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 6 659 - -
Vra6g1485 670 SUPERFAMILY Cullin repeat-like 78 636 IPR016159 -
Vra6g1485 670 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 659 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1485 Vra-Chr6 29505650 29508435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1485 6 670 EXO70 exocyst subunit family AT4G31540 72.230 0.0 1023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1485 6 29505650 29508435 Vra6g1485 6 29505650 29508435 ECH