Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1479 ATGTGGCTACAGAAGCATAATTGCGACAAGAAGGATGGGGTGCGTGGAATAGTGGCAGTGGGAATTGATTCAGACAAGGGGAGCCAGAATGCACTAAAATGGACCATTGATCATCTCCTCCCCAAAGGGTCAAATGTAGTTCTCATTCATGTCAAGACTAAGCCCTCTTCTCTTCATCCATCAGTTTCTCTTGGGAACCCTAGGGCAAATGGTATTGCTGAGCATGCACTTGTTTGCAAGGACCCTGATGAACATACCAAAGAAGTTTTCCATCCATACCGTGTATTCTGTGCACGGAAAGATATACACTGCAAGGACGTTGTAATAGAAGATGTAGACGTAGCCAAAGCTTTAATTGAATATGCTTCTCAATATGCAATTGAGCACTTAGTCATAGGCACTTCAAACAAAGGTGGTTTTCTTAGAAGATTCAAGATAGCAGATATTCCAGGAACAGTTTCAAAAGGGGCACCAGATTTCTGCACAGTATATGTTGTTACTAAAGGGAAGATTCAATCCATGCGATCTGCTTCTCGTGCTGCTCCAACTTTTTCCCCTCTTCAAAACCAACTTTCTCATCACAGTAGCAGATTAGACCTACCGGAACCACGTGTAGTCAGAGGGCTTGAAAGGAGGTCTCTTGATGTACCACGCCGTATGGCACATGATGATCCAGAGCCCTTTAGGTCACCATTCACTAGGAGAGGAGGGACTAATGAGAAGTATGGGGATATTCCAGGGCCAGAGACTGACATAAGTTTTGTAAGCTCTAGAAGATCAAGTACAGATCGCTCATTCCCATTGTATAACAACAGCAACCACTACCCAGAGTCCAATCCCAGGCTATCATATAGCTCTGACATAGATGGAAGTAATTATAGCTTTGAGTCAATACCTTTTGGAAGAAGGTCTATGGATATCTGCTCTGATTTCTCATCCTTCTCACAAGAGAGTGATGGCTTGTCATCCTCTGCATCACAGGGCATGGATGATGTGGAGGCTGAAATGAGAAGACTAAAATTGGAGCTCAAGCAAACAATGGAAATGTATAGCAATGCCTGCAAAGAAGCACTCACTGCACAGCAAAAGGCTGTGGAACTCCAACGCTGGAAATTAGAGGAAGAGAGGAGATTAGAGGAGGCAAGGCTTGCCGAAGAAGCTGCATTGGCGATAGCAGAAAAGGAGAAGGCAAGATCAAAAGCAGCCATCGAGACAGCTGAAGCACAGAAGAGGATTGCAGAACTGGAATCACAGAAGAGAATCAATGCTGAAATGAAAGCATTGATGGAAACAGAAGAGAAAAGAAAAGCAGTGGATGCTTTATCAGGCACTGGTTTGAGGTATAGAAGGTACACAATTGAGGAGATTGAAGCTGCCACACATTTTTTTACTGAGTCACAGAAGATCGGAGAAGGGGGTTATGGTCCAGTTTACAAGTGCCTTCTGGACCATACACCTGTGGCAGTTAAGGTTCTAAGTCCTGACGCAGCACAAGGAAGGTCACAGTTTCAAAGAGAGGTTGAGGTACTGAGTTGCATTCGGCATCCAAACATGGTTCTCCTCATAGGTGCCTGCCCTGAGTATGGCTGCCTTGTGTATGAGTACATGGCCAATGGAAGCTTAGATGACTGCCTCTTCTGCCGAGGAAACAGGCCCCCAATTCCATGGCAGCTCAGGTTCAAAATTGCAGCTGAAATTGGCACAGGTTTGTTGTTCCTCCATCAGACCAAACCTGAGCCTCTTGTGCACAGAGACCTTAAACCAGCCAACATCTTGCTGGACAGAAACTATGTGGCCAAGATCAGTGATGTAGGTTTGGCCAGGCTGGTTCCACCGTCAGTGGCAGACAATGTGACACAGTATAGGATGACATCGGCTGCTGGAACATTCTGTTACATAGACCCTGAGTACCAGCAGACAGGAATGCTGGGAGTGAAGTCTGACATATACTCTCTTGGGATCATTTTCTTGCAAATTTTGACAGCAAAACCTCCAATGGGTTTGACTCATAATGTTCAGAGAGCCATTGAGAAGGGAACATTTATTGATATGTTGGATCCAAAAGTGCCTGACTGGCCAACAGAGGATGCCTTGGTCTTTGCAAAGATTGCTGTCAGGTGTGCTGAACTGAGGAGGAGAGACAGGCCTGATCTTGGCAAGGAAGTGCTGCCTGAACTAAACAGGCTAAGAGAACTTGCTGAGAGCCATGATCACTATTCAATGTTTAGTGGCTATGCTAGCCCTTCCAATCAGAGCCAAGTTTCTCTGGATGAAGCCAGTTCTTCACTTCCTCATTCTGGGGAGAGTTCATGA 2313 0.454 MWLQKHNCDKKDGVRGIVAVGIDSDKGSQNALKWTIDHLLPKGSNVVLIHVKTKPSSLHPSVSLGNPRANGIAEHALVCKDPDEHTKEVFHPYRVFCARKDIHCKDVVIEDVDVAKALIEYASQYAIEHLVIGTSNKGGFLRRFKIADIPGTVSKGAPDFCTVYVVTKGKIQSMRSASRAAPTFSPLQNQLSHHSSRLDLPEPRVVRGLERRSLDVPRRMAHDDPEPFRSPFTRRGGTNEKYGDIPGPETDISFVSSRRSSTDRSFPLYNNSNHYPESNPRLSYSSDIDGSNYSFESIPFGRRSMDICSDFSSFSQESDGLSSSASQGMDDVEAEMRRLKLELKQTMEMYSNACKEALTAQQKAVELQRWKLEEERRLEEARLAEEAALAIAEKEKARSKAAIETAEAQKRIAELESQKRINAEMKALMETEEKRKAVDALSGTGLRYRRYTIEEIEAATHFFTESQKIGEGGYGPVYKCLLDHTPVAVKVLSPDAAQGRSQFQREVEVLSCIRHPNMVLLIGACPEYGCLVYEYMANGSLDDCLFCRGNRPPIPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADNVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTAKPPMGLTHNVQRAIEKGTFIDMLDPKVPDWPTEDALVFAKIAVRCAELRRRDRPDLGKEVLPELNRLRELAESHDHYSMFSGYASPSNQSQVSLDEASSSLPHSGESS* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1479 770 MobiDBLite consensus disorder prediction 263 282 - -
Vra6g1479 770 MobiDBLite consensus disorder prediction 219 257 - -
Vra6g1479 770 Pfam Universal stress protein family 18 144 IPR006016 -
Vra6g1479 770 MobiDBLite consensus disorder prediction 743 770 - -
Vra6g1479 770 CDD STK_N 17 169 - -
Vra6g1479 770 Pfam Protein kinase domain 463 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g1479 770 Gene3D HUPs 17 166 IPR014729 -
Vra6g1479 770 PANTHER OS02G0152300 PROTEIN 11 769 - -
Vra6g1479 770 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 144 - -
Vra6g1479 770 Gene3D Transferase(Phosphotransferase) domain 1 536 745 - -
Vra6g1479 770 Coils Coil 329 435 - -
Vra6g1479 770 Gene3D Phosphorylase Kinase; domain 1 444 535 - -
Vra6g1479 770 ProSiteProfiles Protein kinase domain profile. 463 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g1479 770 SUPERFAMILY Protein kinase-like (PK-like) 446 718 IPR011009 -
Vra6g1479 770 SMART serkin_6 463 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g1479 770 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 11 769 - -
Vra6g1479 770 ProSitePatterns Serine/Threonine protein kinases active-site signature. 581 593 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1479 Vra-Chr6 29317309 29323306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1479 1 759 Receptor kinase-like Gene Family AT1G78940 56.688 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Vra6g1479 Pkinase 6.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1479 - - gmx:100779981 1197.19