Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1460 CCGCAGGTACTAGTTAGTGGAAGTGACTTCTATGCTTTCCCACGTCTTGATCCAAAAAGTGAAAGAATAGCTTGGATTCAGTGGAGTCATCCATACATGCCATGGGATAAATCAGAACTTTGGGTTGGCTATATTTCTGAAAAAGGAGAGATCTACAAGCAGGTGTCTGTTGCGGGGAATGATCCTGCACTTGTGGAGTCCCCAACTGAGCCCAAGTGGTCTTCTGATGGGGAGCTGTTTTTCATCACGGATAGGGGAAATGGTTTTTGGAATCTCCATAAATGGATTGAGTCTGAGAACAAGGTCTTGCCTGTTTATTCTTTGGAGGCCGAGTTTGCAAGGCCGCTGTGGATTTTTGGCATGAATTCTTATGAATTTCTTGAAGGTCATATACAGAAAAATTTAATTGCTTGCAGTTACAGACAGCAGGGGAAGTCATATCTTGGAATTATTGATGATGTGCCAGACTCAAAGCTAATTCTGCTGGATATCCCTTTCACAGATATAGATAACATTACTTCTGGTAATGATTGCCTCTATGTGGAGGGAGCGTCTGCTGTTTTTCCGTCATCAGTGGCCAAGGTGACTTTAGATAATAATAAATCTAAAGCAGTTGACTTCAACATTATTTGGTCCTCCTCACCGGATAGTTTGAAGTATGCTTCTTACTTTAGTAAACCTGAGTTGATTGAATTCCCAACTGAAGTTCCTGGTCAAAATGCTTATGCATACTTTTACAAACCATGTAATCCTGATTTCCAAGCTAGTGCAGAAGAAAAGCCTCCATTATTATTGAAGAGCCATGGAGGACCAACCGCAGAAGCACGTGGAGTTTTAAATTTGAGCATTCAGTACTGGACTAGTCGGGGTTGGGCATTTGTTGATGTTAATTATGGTGGAAGCACTGGTTATGGCAGGGAGTTTCGTGAACGGCTTTTGGGACGTTGGGGAATAGTTGATGTCAATGACTGTTGTAGTTGTGCTACATACTTGGTTAACAGTGGAAAGGTAGATGGGAAGCGGCTTTGTATTACAGGGGGCTCTGCTGGTGGGTATACCACCTTAGCAGCTCTTGCTTTTAAAGAAACTTTTAAGGCTGGTGCTTCTTTGTATGGTGTAGCTGACGTGAACTTGTTGAGAGCGGAAACTCATAAATTTGAATCTCATTATATCGATAGACTGGGTGGAGGTGAGAAAGGGTGCTATGAAAGATCACCAATCAATCATGTTGACAAATTTTCTTGTCCCATAATTTTATTTCAGGGGTTGGAGGACAAGGTTGTACCACCAGAACAAGCTCGAAAAATTTACCAGGCTCTAAAGGAAAAAGGTGTGCCAGTTGCTCTTGTTGAGTATGAAGGAGAACAACATGGTTTCCGAAAGGCTGAGAACATTAAGTTTACACTTGAACAACAAATGGTCTTCTTTGCACGATTGGTTGGACACTTCAATGTTGCTGATGATATTACTCCCATCAAAATTGACAACTTTGATTGA 1497 0.4162 PQVLVSGSDFYAFPRLDPKSERIAWIQWSHPYMPWDKSELWVGYISEKGEIYKQVSVAGNDPALVESPTEPKWSSDGELFFITDRGNGFWNLHKWIESENKVLPVYSLEAEFARPLWIFGMNSYEFLEGHIQKNLIACSYRQQGKSYLGIIDDVPDSKLILLDIPFTDIDNITSGNDCLYVEGASAVFPSSVAKVTLDNNKSKAVDFNIIWSSSPDSLKYASYFSKPELIEFPTEVPGQNAYAYFYKPCNPDFQASAEEKPPLLLKSHGGPTAEARGVLNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATYLVNSGKVDGKRLCITGGSAGGYTTLAALAFKETFKAGASLYGVADVNLLRAETHKFESHYIDRLGGGEKGCYERSPINHVDKFSCPIILFQGLEDKVVPPEQARKIYQALKEKGVPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARLVGHFNVADDITPIKIDNFD* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1460 498 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 1 498 - -
Vra6g1460 498 SUPERFAMILY Tricorn protease domain 2 8 163 - -
Vra6g1460 498 Pfam Prolyl oligopeptidase family 282 481 IPR001375 GO:0006508|GO:0008236
Vra6g1460 498 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN-RELATED 1 498 - -
Vra6g1460 498 Gene3D alpha/beta hydrolase 219 487 IPR029058 -
Vra6g1460 498 SUPERFAMILY alpha/beta-Hydrolases 213 496 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1460 Vra-Chr6 28848747 28853796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1460 1 498 Carbohydrate Esterase AT5G36210 77.711 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1460 - - vra:106763676 1034.25