Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1459 ATGGCGTTCTCCACAGTTAGCGTCACCGCTGCTCCCTATGGCTCTTGGAAATCCCCCATCACCGGTGACGTTGTCTCTGGCGCCACCAAGGACCTGGGCGGCACCGCCGTGGATGGCCGTGGCCGCCTCATTTTGCTGGAATTCCGTCCATTAGAATCAGGGCGTGGAGTTCTTGTTCTTGAGCCAGAAAAAGTAGGAGGTGAGACTGTGGATATTACTCCTAAGGAGTTTGGAGTGAGAACATTGGCTCAGGAATATGGAGGCGCTGCTTTTACTGTTTCAGGGGATGTTGTCTTCTTTGCAAATTACAATGATCAGAGGTTGTACAAGCAGTCCATCAGTTCTCTGGATGAGCCTCCTCTACCATTCACTCCGGATTATGGTGGACCTGTAGTCAGCTATGCTGATGGAATATTGGATGCACGATTTAATCGTTTTCTTTGTGTTAGGGAAGATCGTCGTGAAAGCAGTCTAAATCCACCTACAACTATTGTATCCATAGCACTTGGCAGCAAAGATGTTCAGGAACCAGTTGTTCTAGTTGGTGGGAGTGACTTCTATGCCTACCCACGTTTAGATTCTAAAAGTGAGAGAATAGCATGGATTCAGTGGAATCACCCCAACATGCCATGGGACAAAACAGAACTTTGGGTTGGCTATATTTCTGAAAATGGTGAGATCTACAAACGTGTTTGTGTTGCTGGGAATGATCCTTTACTTGTGGAGTCTCCAACTGAACCCAAGTGGTCCCCTGAGGGGGAGTTGTTTTTCATCACAGATAGAGAAAATGGTTTTTGGAATCTCCACAAATGGATTGAGTCTGAGAATAAGGTCATGTCAGTTTATTCTTTGGAAGCTGAATTTACAAGGCCACTCTGGACTTTTGGTGTGAATTCTTATGAATTTGTCCAAAGTTCTAAACAGTTAATTGCTTGCAGCTACAGGCAGCATGGAAAGTCATATCTGGGTATTGTTGATGTAGAGGGCTCAAAGCTAACTGTGATTGATTTCCCTTGCACAGACATAAATAACATAACATCTGGTAATGATTTCTTGTACGTGGAGGGAGCATCTGAGGTTCTTCCATCATCAGTGGCCAAGGTGACTTTTGATGATGATAAATCAAAAGCAGTGGATTTCAATATTATCTGGTCCTCATCACCAGATAGTCTAAAGTATAGCTCATACATCAGTAAGCCAGAGTTGATTGAATTCCCAACTGCCGTTCCTGGTCAAAATGCTTATGCATACTTTTATCCACCATCTAATCCTGATTTCCAAGCTAGTGAAGAAGAAAAGCCTCCACTGTTATTGAAGAGTCACGGTGGCCCAACTCAAGAAACTCGTGGAATTTTAAATTTGAGCGTTCAGTATTGGACTAGCCGAGGTTGGGCAGTCGTTGATGTTAATTATGGGGGAAGCACTGGTTATGGCAGGGCATACAGAGAACGACTTTTGAGGCAGTGGGGAATAGTTGATGTTAATGACTGTTGTAGTTGTGCTACCTATTTGGTGGAGAATGGAAGGGTGGATAAGGAGAGGCTGTGTATAATGGGTGGCTCTGCTGGTGGTTATACCACCTTGGCAGTTCTTGCTTTCAGAAATACTTTTCAGGCTGGTGCTTCTTTGTATGGAATAGCTGACTTGAATTTGTTGAGAGCAGAAACTCATAAGTTTGAATCCCATTATGTTGAAAATCTAGTTGGAGGTGATAAGGAGATGTATGAAAGATCTCCTATTAATCATGTAGATGATTTTTCTTGTCCCATTATAATATTTCAAGGATTGGAGGACAAGGTTGTGCCACCGGATCAAGCTGAAAAAATATACCAGGCAGTGAAGGAGAAAGGTGTGCCAGTTGCTCTTGTTGAGTATGAAGGGGAACAACACGGTTTCCGAAAGGCTGAGAATATTAAGAATACAATTGAACAAGAAATGGTATTCTTTGCACGATTGATTGGGCACTTTGATGTTGCTGATGATATTACTCCTATCAAAATTGACAACTTTGATTGCTAA 2019 0.4294 MAFSTVSVTAAPYGSWKSPITGDVVSGATKDLGGTAVDGRGRLILLEFRPLESGRGVLVLEPEKVGGETVDITPKEFGVRTLAQEYGGAAFTVSGDVVFFANYNDQRLYKQSISSLDEPPLPFTPDYGGPVVSYADGILDARFNRFLCVREDRRESSLNPPTTIVSIALGSKDVQEPVVLVGGSDFYAYPRLDSKSERIAWIQWNHPNMPWDKTELWVGYISENGEIYKRVCVAGNDPLLVESPTEPKWSPEGELFFITDRENGFWNLHKWIESENKVMSVYSLEAEFTRPLWTFGVNSYEFVQSSKQLIACSYRQHGKSYLGIVDVEGSKLTVIDFPCTDINNITSGNDFLYVEGASEVLPSSVAKVTFDDDKSKAVDFNIIWSSSPDSLKYSSYISKPELIEFPTAVPGQNAYAYFYPPSNPDFQASEEEKPPLLLKSHGGPTQETRGILNLSVQYWTSRGWAVVDVNYGGSTGYGRAYRERLLRQWGIVDVNDCCSCATYLVENGRVDKERLCIMGGSAGGYTTLAVLAFRNTFQAGASLYGIADLNLLRAETHKFESHYVENLVGGDKEMYERSPINHVDDFSCPIIIFQGLEDKVVPPDQAEKIYQAVKEKGVPVALVEYEGEQHGFRKAENIKNTIEQEMVFFARLIGHFDVADDITPIKIDNFDC* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1459 672 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN-RELATED 8 671 - -
Vra6g1459 672 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 8 671 - -
Vra6g1459 672 SUPERFAMILY alpha/beta-Hydrolases 400 652 IPR029058 -
Vra6g1459 672 SUPERFAMILY Tricorn protease domain 2 88 353 - -
Vra6g1459 672 Gene3D alpha/beta hydrolase 392 659 IPR029058 -
Vra6g1459 672 Pfam Prolyl oligopeptidase family 455 654 IPR001375 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1459 Vra-Chr6 28828818 28837333 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1459 8 671 Carbohydrate Esterase AT5G36210 70.315 0.0 988
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1459 - - gmx:100794040 1267.29