Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1434 ATGGTTCCTCCTGGCCCCCCTACGCCTCTTGGTGCCCAGTCTGTGCCGTCACTTTTGAGATCGAATTCTGGAATGTTGGGGGGTCAAGGCGGCCCTGTGCCTTCACAAACTTCGTTCCCTTCGCTGGTTGCGCAGCGAAACCAGTTTAACAACATGAACATGATAGGTAATATGTCTAATGTAACTTCCTTATTGAATCAGTCTTTTCCGAATGGAATTCCGAATTCTGGACTAGCTGGCCATGGGAGCAGCCAGCGCGGTGGAGGGGTTGATGCTGGGGCAGAATCGGATCCGCTCTCTGGTGTTGGCAGTGGAATCAATTTTGGCAATGCTTTGCAATCGAATTTGGGTAACCCGGGTTCATCTGGTCAAGGTCAGAGTCAACAATTTTCAAATGCTTCTGGTAACCAGATGATGTCAGATCAACAGCATTCCCAGCAACTCGAACTTCAGAGTTTTCAGCATAGTCAACCATCAATGCAACAGTTCTCTGCTCCTCTGAACGCTCAGCAGCAACAACAGCATTTTCAGTCAATTCGTGGTGGAATGGGTGGTGTTGGATCGGTTAAGTTGGAGCCACAGGTAAACAACGACCAGTTTGGGCAGCAGCAGCAGCAATTGTCTTCAAGGAATCTTGCTCAGGTGAAGTTGGAACCTCAACAGCTTCAAACAATGAGAAACATGGCAGCAGTAAAAATGGAGCCTCAACATACTGATCAACAGTTTTTGCATCAGCAACAGCAACAGCAGCAACAACAACAACAACTTCTCCACATGTCAAGGCAATCCTCTCAGGCTGCTGCTGCTCACATGAATCATCTGTTGCAGCAGCAGAGACTTTTGCAATATCAACAACATCAGCAACAGCAACAACAACAACTCTTGAAGGCAATGCCTCAACAACGACCCCATCTACCACAGCAGTTTCAACAGCAGAATATGCGGTCTCCTGTGAAGCCTCCTTATGAACCTGGAATGTGTGCTAGGCGGCTAACCCATTACATGTATCAGCAACAGCATAGACCTGAAGATAATAACATTGAATTCTGGAGGAAATTTGTTGCTGAGTATTTTGCTCCGAATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTGGCAGACAAACTACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAAATATGTAATCGCAAACCTGGCCGTGGGTTTGAAGCAACTGCGGAGGTTCTTCCTAGGCTTTTCAAAATAAAGTATGAAAGTGGTACTCTGGAAGAGCTCCTTTATGTTGACATGCCTCGAGAATACCATAATTCCTCTGGACAAATTGTCCTAGATTATGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAGCTTCGAATAGTTTTTTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGACATGAAGAGCTCATTCCTAGAAGACTGTTAATACCTCAGATTAGTCAGCTTGGAGCAGTTGCTCAAAAATACCAGGCAATTACTCAAAATGCGACACCCAACTTATCTGTTCCAGAGTTACAAAGTAATTGCAACATGTTTGTTGCATCAGCCCGTCAGTTGGCAAAAGCTTTGGAAGTTCCATTGGTCAATGATTTAGGATATACAAAGAGATATGTGCGGTGCCTTCAGATATCAGAAGTGGTAAATAGTATGAAAGACCTGATAGATTATAGCAGAGAAACACGAACTGGACCCATGGACAGCTTAGCAAAATTTCCTCGTAGAACAAGTGGTTCGTCTGGACTTCATAGTCAGGCACAACAGTCTGAAGATCATTTACAGCAGCAGTCACAGCCTCAGCAGCCACTCCCGCATATGGTTCCCCATACTTCAAATGGTGATCAAAATTCTGTGCAAACTGCTGCGATGCAGATTACTTCTACCAATGGTGTGACAAATGTAAATAATTCTGTCAATGCAGCATCTGCATCAACCACCACAAGCACCATTGTTGGACTTCTCCACCAGAATTCTGTGAATTCTAGACAAAATTCAATGAACAATGCAAGTAGTCCTTATGGAGGTAGTTCGGTTCAAATTCCATCCCCAGGTTCGTCTGGTAATGTTCCACAAGCGCAACCAAATGCATCCCCTTTTCAATCACCCACACCATCCTCATCTAACAATCCACAAACATCTCATCCGGCATTAACTTCTGGAAACCACATGGGTACGGCAAATTCACCAGCCAATATTCCCTTGCAACAACAACAGACTTCTCACCCTGCTGAAGCTGACACGACGGATGCCCAGAGCTCAGTCCAGAAAATCATTCATGATATGATGATGTCCTCCCAGATGAACGGCCCAGGTGGAATGACTGGTTCTCTTGGAAACGACATGAAAAATGTAAACGGGATTCTACAAGGGAGTAACAATTCAGGGCTCAACAATAACGGTGGCCATGTGGGTAATGGGGGTGTGAACAGTAATTCAGGTGTTGGGGTTGGTGGTTATGGCACAATGGGTCTTGGTCCATCGGGTATGAGCAATGGAATGAGACCTGTAATGGGACATAATTCCATAATGAATGGAAGGGGAGGACTGGCATCTCTTGCTCGCGAGCAAGTTATGAATCAGCAGGATTTGTCAACCCAACTACTTAGTGGGCTAGGAGCAGTAAATGGCTTTAATAATCTTCAATTTGATTGGAAACCATCTCCATGA 2712 0.4499 MVPPGPPTPLGAQSVPSLLRSNSGMLGGQGGPVPSQTSFPSLVAQRNQFNNMNMIGNMSNVTSLLNQSFPNGIPNSGLAGHGSSQRGGGVDAGAESDPLSGVGSGINFGNALQSNLGNPGSSGQGQSQQFSNASGNQMMSDQQHSQQLELQSFQHSQPSMQQFSAPLNAQQQQQHFQSIRGGMGGVGSVKLEPQVNNDQFGQQQQQLSSRNLAQVKLEPQQLQTMRNMAAVKMEPQHTDQQFLHQQQQQQQQQQQLLHMSRQSSQAAAAHMNHLLQQQRLLQYQQHQQQQQQQLLKAMPQQRPHLPQQFQQQNMRSPVKPPYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQISQLGAVAQKYQAITQNATPNLSVPELQSNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETRTGPMDSLAKFPRRTSGSSGLHSQAQQSEDHLQQQSQPQQPLPHMVPHTSNGDQNSVQTAAMQITSTNGVTNVNNSVNAASASTTTSTIVGLLHQNSVNSRQNSMNNASSPYGGSSVQIPSPGSSGNVPQAQPNASPFQSPTPSSSNNPQTSHPALTSGNHMGTANSPANIPLQQQQTSHPAEADTTDAQSSVQKIIHDMMMSSQMNGPGGMTGSLGNDMKNVNGILQGSNNSGLNNNGGHVGNGGVNSNSGVGVGGYGTMGLGPSGMSNGMRPVMGHNSIMNGRGGLASLAREQVMNQQDLSTQLLSGLGAVNGFNNLQFDWKPSP* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1434 903 MobiDBLite consensus disorder prediction 75 191 - -
Vra6g1434 903 Pfam LIM-domain binding protein 330 584 IPR029005 -
Vra6g1434 903 MobiDBLite consensus disorder prediction 588 631 - -
Vra6g1434 903 MobiDBLite consensus disorder prediction 14 39 - -
Vra6g1434 903 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 902 - -
Vra6g1434 903 MobiDBLite consensus disorder prediction 291 322 - -
Vra6g1434 903 MobiDBLite consensus disorder prediction 291 317 - -
Vra6g1434 903 MobiDBLite consensus disorder prediction 676 767 - -
Vra6g1434 903 MobiDBLite consensus disorder prediction 106 179 - -
Vra6g1434 903 MobiDBLite consensus disorder prediction 578 631 - -
Vra6g1434 903 MobiDBLite consensus disorder prediction 804 824 - -
Vra6g1434 903 MobiDBLite consensus disorder prediction 1 39 - -
Vra6g1434 903 PANTHER LIM DOMAIN-BINDING PROTEIN 1 902 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1434 Vra-Chr6 28238904 28250242 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1434 1 803 C2H2 Transcription Factor Family AT1G43850 61.747 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1434 - - gmx:100798031 1355.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1434 6 28238904 28250242 Vra6g1434 6 28238904 28250242 ECH