Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1431 ATGTCATTGGTTATATCTACAGAGTTGGCTGATGCATCATATAGGAATGCCAAGCTCTACACACTAAAGGGAACTGATGTTACACCTGATCTGTCCTCCCACAATTTTGTTCCGGATAAGCACAGAAACATGTATATCACAGATTCTTACTCCAGTGAGAATTATGAAAAGTACTTCCGTGATTCACCATCAGAAGAACTGATAGAACCGTCTAGTTCCAGCATATCAGGAAACTCAGTTCACCCTGACTCTTCTTACTTTCTCAGAGCTAGTTCAGGAGCTTCTGTGATTGTTAATAACCCATTTGACAGTCGTATCTTGTCTACAAGGCGTCACAATGCCTATCAGTCCAGTTTTGAATCAGATTTTCTGGAAAATAGGAGCCCTGATGGCCTTGACTTTGATGGTGAAATGAGATTAAAACTACAAGAATTGGAGAGGGCTTTGTTTTCTGATGAAGAAGAGGAGGAAGACATATTTGAGACTGTCCAAAGCATGGACATTGATCCTGACATGGCTGAGTGGGCCAATCCACTTCAAGGTATGCTACTTCATGACTCACCAAAGGAGTCCTCATCCTCTGATTCTTCCAATATTAGCAGCATAAGTAGCACCACCAAAGAAACTTCACAGAACTCACCCCAGACCCCCAAACAATTACTTTATGAATGTGCTAGAGCGCTGTCAGAAGGAAATGAAGAGCAAGCCAAATCTATGATAAACAATCTCAGGCAAATGGTCTCAATTCAGGGGGAACCTTCTCAAAGAATTGCAGCCTACATGGTGGAAGGGCTTGCAGCTCGTGTTGCTTCATCCGGAAAATGCATCTATCAAGCATTGAGATGCAAAGAACCTCCTTCTTCAGATCGTCTTGCAGCTATGCAGATCCTATTTGAGGTCTGCCCGTGCTTTAAATTCGGATTCATAGCTGCAAATGGTGCGATAGTTGAGGCTGTTAGAGATGAAAAGAAGGTTCACATAATAGACTTTGACATCAGCCAAGGAACACAGTACATAACTCTAATACAAACACTTGCTTCAATGCCAGGTAGGCGACCTCATGTGAGATTAACTGGGGTGGATGATCCTGAGACTGTGCAGCGCTCTGTTGGTGGCATGAACATCATAGGAAAAAGGCTTGAAAAGCTGGCAGAGGAACTAGGATTGTCATTTGAGTTTCGAGCAGTGGCTTCAAAGACCTCAATTGTCTCACCATCAATGCTCAATTGTCGTCCTGGGGAAGCACTTGTAGTGAACTTTGCATTCCAGCTTCATCACATGCGTGATGAAACTGTATCCACAGTGAACGAGAGAGACCAACTTCTTCGCCTGGTTAAGAGCTTGAATCCAAAACTTGTGACAATTGTGGAGCAGGACATGAACACCAACACCTCCCCTTTTCTCCAAAGATTTGTTGAAGCATACAATTACTATTCTGCTGTGTTTGACACTCTTGATGCAACTCTGCCTAGGGAGAGCCAGGACAGGATGAATGTTGAAAGGCAATGCTTGGCAAAGGACATTGTCAACATTGTGGCTTGTGAGGGCGAGGATCGAATAGAACGGTACGAAGTTGCCGGAAAATGGAGGGCAAGGTTGACCATGGCTGGCTTCACTCCATGTCCAATGAGCACAAATGTTAGAGAAGCAATTAGGAAACTCATAATTACACAATACTGTGACAGGTTCAAGATAAAGGAGGAAATGGGAGCACTTCATTTTGGGTGGGAAGACAAAAACTTAATTGTTACTTCAGCATGGAAGTGA 1767 0.4341 MSLVISTELADASYRNAKLYTLKGTDVTPDLSSHNFVPDKHRNMYITDSYSSENYEKYFRDSPSEELIEPSSSSISGNSVHPDSSYFLRASSGASVIVNNPFDSRILSTRRHNAYQSSFESDFLENRSPDGLDFDGEMRLKLQELERALFSDEEEEEDIFETVQSMDIDPDMAEWANPLQGMLLHDSPKESSSSDSSNISSISSTTKETSQNSPQTPKQLLYECARALSEGNEEQAKSMINNLRQMVSIQGEPSQRIAAYMVEGLAARVASSGKCIYQALRCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAIVEAVRDEKKVHIIDFDISQGTQYITLIQTLASMPGRRPHVRLTGVDDPETVQRSVGGMNIIGKRLEKLAEELGLSFEFRAVASKTSIVSPSMLNCRPGEALVVNFAFQLHHMRDETVSTVNERDQLLRLVKSLNPKLVTIVEQDMNTNTSPFLQRFVEAYNYYSAVFDTLDATLPRESQDRMNVERQCLAKDIVNIVACEGEDRIERYEVAGKWRARLTMAGFTPCPMSTNVREAIRKLIITQYCDRFKIKEEMGALHFGWEDKNLIVTSAWK* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1431 588 MobiDBLite consensus disorder prediction 186 217 - -
Vra6g1431 588 Pfam GRAS domain family 218 588 IPR005202 -
Vra6g1431 588 MobiDBLite consensus disorder prediction 183 217 - -
Vra6g1431 588 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 587 IPR030011 GO:0003700|GO:0005634
Vra6g1431 588 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 587 IPR005202 -
Vra6g1431 588 ProSiteProfiles GRAS family profile. 208 588 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1431 Vra-Chr6 28170574 28174429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1431 1 588 GRAS Transcription Factor Family AT1G21450 60.368 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vra6g1431 GRAS 6.6e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1431 - - gmx:100807048 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1431 6 28170574 28174429 Vra6g1431 6 28170574 28174429 ECH