Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1408 ATGCAGCTATATCATCATCCGTTGGATTTGGACAGCCAGAGGGTGAGAATTTCATTGGAGGAGGAGGGTGTGGATTATACATCTCACCATGTCAATCCCATTACTGGCAAGAACTTGGATTCTTCTTTCTTCAAGATGAATCGCCGTGGAAGGGTCCCTGTTTTCCAAAATGGTTCTCATATCATTTACAACACTATTGATATAATCCAGTACATAGAAAGAATTGCTGTGGTTTCCTCAGGGGCTGAGAGTATCAGTACCAGTAACAGGGAAGTGATTGAATGGATGCAGAGAATACAAGACTGGGACCCCAAGTTTTTCACACTTGCACATATACCAGAGAAATATCGTGTTTATGTTTCCAAGTTCATAAGGCAAGTGGTGATTGCTCGCATGTCCGAGTCACCTGAATTAGCAGGAGATTACCATAGGAAATTGAGAGAAGCCTATGAAACTGAAGAGAAATTGAAAGAAGCAGATGTTTTGAGAAGGGGCAAAGAGCATTTGGTTAGATTGCTTGATGAGGTGGAGAGGCAACTATGTGAAACACCTTTTTTGGCAGGTCAAGATTTTACCATGGCTGATGTGATGCTCATTCCAGTATTAGCTCGTTTAAAACTCTTGGATTTAGAGAAGGAGTACATAACTGGAAGGCCAAACATTGCTGAGTACTGGCTTTTGGTTCAGGAAAGGCCTAGTTATAAAAGGGTGATTGGTAAGTACTTTAATGGTTGGAGAAAGCACAAAACACTCTTGAAAACATGGTTCTTAGTTCGTATTCGAAGTTTGCTGAAAAGGTACTAG 804 0.4104 MQLYHHPLDLDSQRVRISLEEEGVDYTSHHVNPITGKNLDSSFFKMNRRGRVPVFQNGSHIIYNTIDIIQYIERIAVVSSGAESISTSNREVIEWMQRIQDWDPKFFTLAHIPEKYRVYVSKFIRQVVIARMSESPELAGDYHRKLREAYETEEKLKEADVLRRGKEHLVRLLDEVERQLCETPFLAGQDFTMADVMLIPVLARLKLLDLEKEYITGRPNIAEYWLLVQERPSYKRVIGKYFNGWRKHKTLLKTWFLVRIRSLLKRY* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1408 267 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
Vra6g1408 267 CDD GST_N_family 1 73 - -
Vra6g1408 267 Gene3D Glutaredoxin 1 75 - -
Vra6g1408 267 SUPERFAMILY GST C-terminal domain-like 156 241 IPR036282 -
Vra6g1408 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Vra6g1408 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Vra6g1408 267 Gene3D - 125 238 - -
Vra6g1408 267 SFLD Glutathione Transferase (cytosolic) 1 231 IPR040079 -
Vra6g1408 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Vra6g1408 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 251 IPR010987 -
Vra6g1408 267 Pfam Glutathione S-transferase, C-terminal domain 161 224 - -
Vra6g1408 267 CDD GST_C_family 147 225 - -
Vra6g1408 267 SFLD Main (cytGST) 1 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1408 Vra-Chr6 27704964 27707605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1408 1 267 Glutathione S-transferase Gene Family AT1G77290 68.539 1.14e-140 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1408 K22077 - gmx:100808461 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1408 6 27704964 27707605 Vra6g1408 6 27704964 27707605 ECH
Vra6g1408 6 27704964 27707605 Vra5g0744 5 12691192 12694340 PCT