Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1355 ATGGAAGAGCAAATGAAAACACTGGTTAATCATCACTCCACCTACACATCCAGGCTTGACAAAATGGATCAAGAGATTACTGCACTTCGGAAGCTAATTGGGAATCAAAATCTTGGTGATGAAAGAGTAGCAATAGATGACGAGGTTGAGAAAGAATATGATGGTGATGATGACAGTAAAGAAAAAGAAAGAGAGCAAAAGGAAACAGACTTCTGCTTGATGGAAAAATCTATAATATCGGAAAGCAGCGTGAGTAGTGATGAATCTGAATGCACCGAAAATAGAATTAACGCACATAGCAAGCATGGCAGTCACATTCTTAGCTCTGCCTCTGGTTTGAAGAAGCTTGATGAGTACCTTCTCTCACGCAGTTACATCACTGGGTACCAAGCTTCAAAGGATGATCTCACTGTCTATGTAGCTTTGCGAACTGCTCCATCAACTGAGTATGTCAACGTGTCTAGGTGGTTCAAGCACATTGATGCTTTGTTGAGAATCTCTGGTGTTTCTGGTGAGGGATCTGGTGTCACTGTTAAGGGATCTCTTGTTCCTGAGCCTGTTGCAACTCCCCCTGTTAAGGTGTCCCAGTCTTTGGTGTTTTCACGTGAAAGGCTCTTTGCACCGCAGATGCCTTGTTGTAACAGCTCATATGGAGTTGTTACTTGA 666 0.4279 MEEQMKTLVNHHSTYTSRLDKMDQEITALRKLIGNQNLGDERVAIDDEVEKEYDGDDDSKEKEREQKETDFCLMEKSIISESSVSSDESECTENRINAHSKHGSHILSSASGLKKLDEYLLSRSYITGYQASKDDLTVYVALRTAPSTEYVNVSRWFKHIDALLRISGVSGEGSGVTVKGSLVPEPVATPPVKVSQSLVFSRERLFAPQMPCCNSSYGVVT* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1355 221 MobiDBLite consensus disorder prediction 43 67 - -
Vra6g1355 221 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 107 194 - -
Vra6g1355 221 Gene3D - 80 179 - -
Vra6g1355 221 SUPERFAMILY GST C-terminal domain-like 109 166 IPR036282 -
Vra6g1355 221 PANTHER ELONGATION FACTOR 1-DELTA 1-RELATED 107 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1355 Vra-Chr6 26449717 26503804 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1355 107 191 Eukaryotic Initiation Factors Gene Family AT2G18110 73.563 3.40e-39 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1355 K03232 - gmx:100777627 140.584