Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1328 ATGGAAGAGTTATGTGGAGCCAAGGTTGGCAACATGGTTAATAAGGCCAAGCCATATGTGTTAACTGTGGGGTTGCAATTTGGGATGGCAGGGACATACCTCTTCACCATGGCAAGTCTCAACCATGGAATGAGTCGTTTTGTGTTCATTGTGTATCGCAATGCCATTGCTGCATTGGCCCTTGCTCCCTTTGCCTTGATATTTGAAAGGAAAGTTAGGCCAAAGATGACATGGACTGTGTTCCTGCAGATACTAGTACTTGGATTTCTTGAGCCAGTGGTTGACCAAGGTTTTACTTTCTTGGGGATGCAATACACTTCTGCTTCCTTTGCATCTGCTGTAATGAATGCCGTACCCTCTGTAACCTTTGTGCTTGCACTATTTCTCAGGTTAGAGCGGGTAAACATGAGGGAACTACGTAGCCAGGCGAAAGTGGTGGGAACCTTGGTCACATTTGCTGGGGCTTTGTTAATGACACTATACAAAGGCCCTCAATTTGACCTATTTCATCACTCAAACACAACTCACCAACAAAGTGGAAGCAACTCCTCTCAGAATAATCACTCTCACTGGGTCTCAGGAACTCTCTTCATTTGCCTGGGTTGTCTCGCTTGGTCTTCCTTCTACATATTGCAGTCCATAACGGTGAAAAGGTACCCTGCGGAACTGTCACTGTCATCGTTGATATGCTTGGGAGGTGCATTGCAAAGTGCTGTGGTTGCTGTGATTGCAGATCGCAACCCTCGTGCATGGGCTATCGGTTTCGACTACACCCTCTATGGCCCTCTATACACTGGAATAATGAGTTCAGGAATAGCATATTATATACAGGGGTTGGTAATGCAGAGCAGAGGTCCAGTATTTGTAACATCCTTCAATCCTCTTTGCATGATCATTGTTACTGCTTTGGGCTCCCTTCTCCTTGGAGAACACCTCTACCTCGGAAGTATCATTGGAGGCATGATTATCGCAGTGGGTCTTTACTCTGTGGTGTGGGGTAAAGGCAAAGATTATGGAGATGAAGCTTCATCATCACCAGCAAGAACAAAAGAAACAGAAAGAATGCAGCTCCCAATTACCTCAGCAAATAACAAATGA 1098 0.4536 MEELCGAKVGNMVNKAKPYVLTVGLQFGMAGTYLFTMASLNHGMSRFVFIVYRNAIAALALAPFALIFERKVRPKMTWTVFLQILVLGFLEPVVDQGFTFLGMQYTSASFASAVMNAVPSVTFVLALFLRLERVNMRELRSQAKVVGTLVTFAGALLMTLYKGPQFDLFHHSNTTHQQSGSNSSQNNHSHWVSGTLFICLGCLAWSSFYILQSITVKRYPAELSLSSLICLGGALQSAVVAVIADRNPRAWAIGFDYTLYGPLYTGIMSSGIAYYIQGLVMQSRGPVFVTSFNPLCMIIVTALGSLLLGEHLYLGSIIGGMIIAVGLYSVVWGKGKDYGDEASSSPARTKETERMQLPITSANNK* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1328 365 MobiDBLite consensus disorder prediction 349 365 - -
Vra6g1328 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 335 - -
Vra6g1328 365 PANTHER WAT1-RELATED PROTEIN 12 356 IPR030184 GO:0016021|GO:0022857
Vra6g1328 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 163 - -
Vra6g1328 365 MobiDBLite consensus disorder prediction 339 365 - -
Vra6g1328 365 PANTHER WAT1-RELATED PROTEIN 12 356 - -
Vra6g1328 365 Pfam EamA-like transporter family 30 159 IPR000620 GO:0016020|GO:0016021
Vra6g1328 365 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1328 Vra-Chr6 25759533 25762729 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1328 10 365 Nodulin-like Gene Family AT4G08300 47.619 3.30e-123 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1328 - - gmx:100777641 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1328 6 25759533 25762729 Vra6g1328 6 25759533 25762729 ECH