Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1326 ATGGAATGTTGTAAGAAGGTGTATGAGTGGTTATGCAATGCAAAAGCATATCTCATAATATTGAGCTTGCAATTTGGGTCTGCTGGCATGTACCTTATCACCATGGATGCTCTCAACAAGGGCATGAGCCATTATGTTTTTGTTGTTTATCGCAATATCATCGCCACTGTAGCTCTTGGTCCATTCGCATTTTTTCTTGAAAGGAAAGTTAGGCCGAAGATGACAATTCGGATATTTTCAGAGCTTATGGCAGTGGCTTTTGTCGAGATAATACTTGATCAATGCTTCACCTTCTTGGGAATGAAGTACACCTCAGCATCATTTGCATCTGCGGTGATGAACTCCGTACCCTCCATTACCTTTGTACTGGCAATCATTTTTAGATTGGAGCGTATGAAGCTTAAGGAGGTTGGATGCTTAGCCAAAATGATTGGCACTGTGGTTTCTCTAGGAGGCGCTTTTCTAATGGCACTGTACAAAGGTCCTATTCTTAATATTGCAGGCTCATCAGCCACCAACGTTGGCCAGCCTGAGAATGTCAACGACCCTTCTGGAAATCATTGGCTCTCTGGTGCATGTTTTCTCCTCATAGGCTGTGCTGGCTTCGCTGCTTTCTACATATTACAAACTATAACATTGAGAAAGTACCCAGCAGAGATGTCCCTGGCAACTTGGGTTTGCTTTCTGGGTGCACTTCAGAGCGGTGTACTTACAATTTTCATGGAGCGCAATACCCATGTCTGGTCTCTGGGCTGGGATTCTAGGCTTCTTGCTTATGCATATTCGGGAATAGTAACATCAGCAATCCAATTTTATGTGCAAGGCATGGTTATAAAAACCACAGGGCCAGTGTTTGTGACTGCATTTAATCCCCTGCGTATGATCATAGTCACAGCATTGGCCTGCATAGTCCTCTCGGAGAAACTCCACCTTGGAAGCATTATGGGAGGAGTTGTGGTGGTAGTTGGGCTTTACCTAGTTGTGTGGGGAAAATCTAAAGAACAGAAGAAGCATTCGATGCCAGCGTCCCCTGAAAAGGAGACCCTGCAACGCCAGCAACAGCTACCACTTAGTGTACTCAAAAGTGATGACAGCAATGATAACAAACTTCAAATGGTCATAATTGGAGACAAAAACCACAACATGGAAGAAAGCAGAACAGTTAATATAGAGAACCAGCAACAGTGA 1188 0.4386 MECCKKVYEWLCNAKAYLIILSLQFGSAGMYLITMDALNKGMSHYVFVVYRNIIATVALGPFAFFLERKVRPKMTIRIFSELMAVAFVEIILDQCFTFLGMKYTSASFASAVMNSVPSITFVLAIIFRLERMKLKEVGCLAKMIGTVVSLGGAFLMALYKGPILNIAGSSATNVGQPENVNDPSGNHWLSGACFLLIGCAGFAAFYILQTITLRKYPAEMSLATWVCFLGALQSGVLTIFMERNTHVWSLGWDSRLLAYAYSGIVTSAIQFYVQGMVIKTTGPVFVTAFNPLRMIIVTALACIVLSEKLHLGSIMGGVVVVVGLYLVVWGKSKEQKKHSMPASPEKETLQRQQQLPLSVLKSDDSNDNKLQMVIIGDKNHNMEESRTVNIENQQQ* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1326 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Vra6g1326 395 PANTHER WAT1-RELATED PROTEIN 11 364 IPR030184 GO:0016021|GO:0022857
Vra6g1326 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 333 - -
Vra6g1326 395 PANTHER WAT1-RELATED PROTEIN 11 364 - -
Vra6g1326 395 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020|GO:0016021
Vra6g1326 395 Pfam EamA-like transporter family 27 157 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1326 Vra-Chr6 25629008 25632115 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1326 15 367 Nodulin-like Gene Family AT1G44800 45.070 4.66e-112 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1326 - - gmx:100813852 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1326 6 25629008 25632115 Vra6g1326 6 25629008 25632115 ECH