Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1288 ATGGGAAGCGATGGCGTGAGGAAACCAAGATTGTTGTGCCTTCATGGATTTCGAACAAGCGGAGAAATACTGAAAACGCAGTTACATAAGTGGCCACAATCCGTTCTTGACAACCTTGATCTTGTTTTTGTGGATGCTCCTTTTCCTTGCCAAGGCAAATCCGACGTCGAAGGCATTTTTGATCCTCCTTACTACGAGTGGTTCCAGTTCAACAAGGAATTTACAGAGTACACCAACTTTGACGAGTGCCTTAAGTACATTGAGGACTGCATGATCAAGCACGGACCTATTGATGGGCTTCTGGGTTTCTCACAGGGAGCAATATTATCAGCTGCGCTGCCAGGTCTTCAGGAGAAGGGTGTGGCACTGACGAAGGTTCCCAAGGTGAAATTTGTTGTTATTGTAGGAGGGGCAAAGTTTAGGTCACCGTCTGTGGTGGACAAAGCATATTCTTCTCCCATTAGCTGTCCCTCTCTTCATTTTCTAGGTGAAATGGATTTTTTGAAACAATATGGGATGGAACTACTAGAATCCTGTGTTGAACCCGTGGTGATTCACCACCCCAAAGGACACACAATACCAAGATTAGATGATAAGAGCGTGAAGACCGTGATGGATTTCATCGAAAGGATTAAGAAAGACGTCTCAAAATAA 654 0.445 MGSDGVRKPRLLCLHGFRTSGEILKTQLHKWPQSVLDNLDLVFVDAPFPCQGKSDVEGIFDPPYYEWFQFNKEFTEYTNFDECLKYIEDCMIKHGPIDGLLGFSQGAILSAALPGLQEKGVALTKVPKVKFVVIVGGAKFRSPSVVDKAYSSPISCPSLHFLGEMDFLKQYGMELLESCVEPVVIHHPKGHTIPRLDDKSVKTVMDFIERIKKDVSK* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1288 217 Gene3D alpha/beta hydrolase 5 215 IPR029058 -
Vra6g1288 217 SUPERFAMILY alpha/beta-Hydrolases 7 211 IPR029058 -
Vra6g1288 217 Pfam Serine hydrolase (FSH1) 8 199 IPR005645 -
Vra6g1288 217 PANTHER ESTERASE OVCA2 6 216 - -
Vra6g1288 217 PANTHER DIHYDROFOLATE REDUCTASE 6 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1288 Vra-Chr6 24459111 24461746 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1288 2 194 Sulfurtransferasese or Rhodanese AT1G09280 29.778 1.19e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1288 - - gmx:100500670 423.32