Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1283 ATGTCACTCTCGCCATTTAATCTTAAAGTGGTTGGAATACCAACGAATATCGACTTGGCCAGAGTAATGACATGCCTATTTGAGAAAGATGTTGAATTTCGTCACATTCCTGGGTCAATAGGACGAAGATTTGCAGTAGTTCAGGAGATCGGGAAAACTGATTTTTGTTACGAATCGAGAAGTACATGCAAGTACGTTTGTGAGAAGTTTAGTGAGAAAGGGAATCGAGAACTGTATGGAAGGAATCCATTGGCAAAGAAGAGCATAGAGGAGTGGATGAAAATGGAGGAGGAGAGATTTGATTCACCTTCACGTATTCTCACGTATTACAAGGGACTTAATTCTTTTTCAATGAGAAAAATGAGTTTAGAAGAGTTGGGTGAGATGATGGAGATATATGAGAATACACTCGGGAAGAGTCGTTACCTAGCTGGGGATGAATTCACACTTGCAGATCTCTTCCATCTTCCCCATGTTCATGGCTTGGACAATATCACTGACACCGCTCCACTATTTGCTTCTCCAAACCTTTCCAGATGGTGGAATGATATCTCCTCTCGTCATTCTTGGATGAAGCTTCTTCAAATTCGCCAAGAATACTTGAAAAGGAATTAA 615 0.4065 MSLSPFNLKVVGIPTNIDLARVMTCLFEKDVEFRHIPGSIGRRFAVVQEIGKTDFCYESRSTCKYVCEKFSEKGNRELYGRNPLAKKSIEEWMKMEEERFDSPSRILTYYKGLNSFSMRKMSLEELGEMMEIYENTLGKSRYLAGDEFTLADLFHLPHVHGLDNITDTAPLFASPNLSRWWNDISSRHSWMKLLQIRQEYLKRN* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1283 204 Gene3D - 82 194 - -
Vra6g1283 204 Pfam Glutathione S-transferase, C-terminal domain 118 187 IPR004046 -
Vra6g1283 204 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 82 204 IPR010987 -
Vra6g1283 204 SUPERFAMILY GST C-terminal domain-like 65 200 IPR036282 -
Vra6g1283 204 PANTHER GLUTATHIONE S-TRANSFERASE RHO 9 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1283 Vra-Chr6 24269130 24274384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1283 10 199 Glutathione S-transferase Gene Family AT2G47730 31.754 1.56e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1283 K00799 - vra:106763798 177.178