Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1174 ATGGAAAATGAAGGCTGGAGTAGGTGTCTTTGCTCTGCAGTTACTCTTGTATCAATAATATTGGCTACAATTATTCTCCTACTCCAATCAGATAACTGCCTCGCTAAGCGACACCCACCATGTCCTACTTCATGTGGCCAAATTCGCATAAGTTACCCATTTCGACTGAAAGGCGACCCAGGTGAGTGCGGCGACCCAAGGTATGAGTTAGATTGCGTTAACAACGCCACTCTCTTATTAACCTTTTCCTCGGCAAAATACCTTGTACGAGAGATCGATTACAAGGGATACAAAATCGTTCTTAGAGACCCAGGTCAGGACGAGGACGCTAATTGCTCTTTCATCCCTCGCAATTTCTTATCGGCTTCGGTTTTCTCATATCATTTCGGATCGGAGCCTTTCAGTTGGGAATACTGGTATACTGTTGGAATAGGATACTTCAACTGCTTGAATCCTGTGAGTGACGATCCACGATATGTTAAGGTGGACAGGAGTGGATGTGGCAGCGGAGGGCACGTGTACGCCGTATTAGGATCTTCGTATGATGTTGGTGTGAAGGACATCAAGGTTGGATGCGATCTGATGGTGGCTACGGTTTGGACACCGAAACAGAATGTTACCTACCACAAGTATGATGAGTCTGACAGCTGGGAGGTTGAAGTGCTTGAAGGAATATCGGAGCGGAATGTTACATATGATGATATCCAACGCAAAATAAGTGAGGGATTTTGGTTGTCGTGGTTGTCCATTGTTTGCGAGGATAGATGTGGAAGGGGGACAGAGTGTCTGCATATCAATGAATCCAGCGGAGAAGTCTTTTGTAAGAACCATTACTGTCATTACGCTTACCACACCACCCAAAAGTGCGAACCTTGGCAAAAGGTTTTGGGCTATATTCGAGCTTATCTTAGAGGCATTATTTATGGTAAGATCCTTCTTCGTGATTCCTAA 951 0.449 MENEGWSRCLCSAVTLVSIILATIILLLQSDNCLAKRHPPCPTSCGQIRISYPFRLKGDPGECGDPRYELDCVNNATLLLTFSSAKYLVREIDYKGYKIVLRDPGQDEDANCSFIPRNFLSASVFSYHFGSEPFSWEYWYTVGIGYFNCLNPVSDDPRYVKVDRSGCGSGGHVYAVLGSSYDVGVKDIKVGCDLMVATVWTPKQNVTYHKYDESDSWEVEVLEGISERNVTYDDIQRKISEGFWLSWLSIVCEDRCGRGTECLHINESSGEVFCKNHYCHYAYHTTQKCEPWQKVLGYIRAYLRGIIYGKILLRDS* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1174 316 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 14 309 - -
Vra6g1174 316 Pfam Wall-associated receptor kinase galacturonan-binding 41 102 IPR025287 GO:0030247
Vra6g1174 316 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 309 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1174 Vra-Chr6 19981155 19982836 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1174 43 257 C3H Transcription Factor Family AT2G46495 24.889 1.18e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1174 - - vra:106763548 677.167